Gene : Phvul.007G199200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10302:SF6 - SINGLE-STRANDED DNA-BINDING PROTEIN, MITOCHONDRIAL Genomic Order:  1850
Name:  ? Phvul.007G199200 Secondary Identifier:  ? PAC:37164542
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G199200 0.5kb upstream 0.5kb upstream 4051 true Chr07: 32266614-32270664 Phaseolus vulgaris
Phvul.007G199200 0.5kb upstream 0.5kb upstream 500 false Chr07: 32270165-32270664 Phaseolus vulgaris
Phvul.007G199200 0.5kb downstream 0.5kb downstream 4051 true Chr07: 32266114-32270164 Phaseolus vulgaris
Phvul.007G199200 0.5kb downstream 0.5kb downstream 500 false Chr07: 32266114-32266613 Phaseolus vulgaris
Phvul.007G199200 1.0kb upstream 1.0kb upstream 4551 true Chr07: 32266614-32271164 Phaseolus vulgaris
Phvul.007G199200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 32270165-32271164 Phaseolus vulgaris
Phvul.007G199200 1.0kb downstream 1.0kb downstream 4551 true Chr07: 32265614-32270164 Phaseolus vulgaris
Phvul.007G199200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 32265614-32266613 Phaseolus vulgaris
Phvul.007G199200 2.0kb upstream 2.0kb upstream 5551 true Chr07: 32266614-32272164 Phaseolus vulgaris
Phvul.007G199200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 32270165-32272164 Phaseolus vulgaris
Phvul.007G199200 2.0kb downstream 2.0kb downstream 5551 true Chr07: 32264614-32270164 Phaseolus vulgaris
Phvul.007G199200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 32264614-32266613 Phaseolus vulgaris
Phvul.007G199200 5.0kb upstream 5.0kb upstream 8551 true Chr07: 32266614-32275164 Phaseolus vulgaris
Phvul.007G199200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 32270165-32275164 Phaseolus vulgaris
Phvul.007G199200 5.0kb downstream 5.0kb downstream 8551 true Chr07: 32261614-32270164 Phaseolus vulgaris
Phvul.007G199200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 32261614-32266613 Phaseolus vulgaris
Phvul.007G199200 10.0kb upstream 10.0kb upstream 13551 true Chr07: 32266614-32280164 Phaseolus vulgaris
Phvul.007G199200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 32270165-32280164 Phaseolus vulgaris
Phvul.007G199200 10.0kb downstream 10.0kb downstream 13551 true Chr07: 32256614-32270164 Phaseolus vulgaris
Phvul.007G199200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 32256614-32266613 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300022 5265 Fabidae View MSA
124067311 5270 Rosid View MSA
123743137 5271 Pentapetalae View MSA
122790596 5272 Eudicot View MSA
122047632 5273 Angiosperm View MSA
121349645 5274 Embryophyte View MSA
123381385 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.509 0.0 48.7713    
cufflinks 15.0925 0.0 53.9284    
cufflinks 4.07465 0.0 19.4262   Low
cufflinks 18.5547 0.0 54.9079   High
cufflinks 9.97182 0.0 40.3005    
cufflinks 4.65715 0.0 19.7469   Low
cufflinks 9.62681 0.0 31.4981    
cufflinks 12.4043 0.0 46.8506    
cufflinks 9.98512 0.0 38.8144    
cufflinks 15.091 0.0 46.8674    
cufflinks 12.2116 0.0 39.3497    

0 Strain