Gene : Phvul.005G059400 P. vulgaris v2.1
Genomic Order:  588 Name:  ? Phvul.005G059400
Secondary Identifier:  ? PAC:37154433
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G059400 0.5kb upstream 0.5kb upstream 5649 true Chr05: 8315782-8321430 Phaseolus vulgaris
Phvul.005G059400 0.5kb upstream 0.5kb upstream 500 false Chr05: 8320931-8321430 Phaseolus vulgaris
Phvul.005G059400 0.5kb downstream 0.5kb downstream 5649 true Chr05: 8315282-8320930 Phaseolus vulgaris
Phvul.005G059400 0.5kb downstream 0.5kb downstream 500 false Chr05: 8315282-8315781 Phaseolus vulgaris
Phvul.005G059400 1.0kb upstream 1.0kb upstream 6149 true Chr05: 8315782-8321930 Phaseolus vulgaris
Phvul.005G059400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 8320931-8321930 Phaseolus vulgaris
Phvul.005G059400 1.0kb downstream 1.0kb downstream 6149 true Chr05: 8314782-8320930 Phaseolus vulgaris
Phvul.005G059400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 8314782-8315781 Phaseolus vulgaris
Phvul.005G059400 2.0kb upstream 2.0kb upstream 7149 true Chr05: 8315782-8322930 Phaseolus vulgaris
Phvul.005G059400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 8320931-8322930 Phaseolus vulgaris
Phvul.005G059400 2.0kb downstream 2.0kb downstream 7149 true Chr05: 8313782-8320930 Phaseolus vulgaris
Phvul.005G059400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 8313782-8315781 Phaseolus vulgaris
Phvul.005G059400 5.0kb upstream 5.0kb upstream 10149 true Chr05: 8315782-8325930 Phaseolus vulgaris
Phvul.005G059400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 8320931-8325930 Phaseolus vulgaris
Phvul.005G059400 5.0kb downstream 5.0kb downstream 10149 true Chr05: 8310782-8320930 Phaseolus vulgaris
Phvul.005G059400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 8310782-8315781 Phaseolus vulgaris
Phvul.005G059400 10.0kb upstream 10.0kb upstream 15149 true Chr05: 8315782-8330930 Phaseolus vulgaris
Phvul.005G059400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 8320931-8330930 Phaseolus vulgaris
Phvul.005G059400 10.0kb downstream 10.0kb downstream 15149 true Chr05: 8305782-8320930 Phaseolus vulgaris
Phvul.005G059400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 8305782-8315781 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026396 5273 Angiosperm View MSA
122307251 5265 Fabidae View MSA
124065900 5270 Rosid View MSA
123738543 5271 Pentapetalae View MSA
122790155 5272 Eudicot View MSA
121296309 5274 Embryophyte View MSA
123334495 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.51813 0.0 42.391   High
cufflinks 6.3824 0.0 31.3202    
cufflinks 7.30314 0.0 38.8379    
cufflinks 6.07789 0.0 30.916    
cufflinks 4.76592 0.0 21.773   Low
cufflinks 7.58733 0.0 37.1223    
cufflinks 6.54438 0.0 30.8701    
cufflinks 8.38177 0.0 34.7905   High
cufflinks 5.60869 0.0 17.8535    
cufflinks 5.27842 0.0 23.2323    
cufflinks 5.56489 0.0 22.9052    

0 Strain