Gene : Phvul.005G060200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR33109:SF6 - EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 7-RELATED Genomic Order:  596
Name:  ? Phvul.005G060200 Secondary Identifier:  ? PAC:37153155
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G060200 0.5kb upstream 0.5kb upstream 2471 true Chr05: 8520688-8523158 Phaseolus vulgaris
Phvul.005G060200 0.5kb upstream 0.5kb upstream 500 false Chr05: 8520688-8521187 Phaseolus vulgaris
Phvul.005G060200 0.5kb downstream 0.5kb downstream 2471 true Chr05: 8521188-8523658 Phaseolus vulgaris
Phvul.005G060200 0.5kb downstream 0.5kb downstream 500 false Chr05: 8523159-8523658 Phaseolus vulgaris
Phvul.005G060200 1.0kb upstream 1.0kb upstream 2971 true Chr05: 8520188-8523158 Phaseolus vulgaris
Phvul.005G060200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 8520188-8521187 Phaseolus vulgaris
Phvul.005G060200 1.0kb downstream 1.0kb downstream 2971 true Chr05: 8521188-8524158 Phaseolus vulgaris
Phvul.005G060200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 8523159-8524158 Phaseolus vulgaris
Phvul.005G060200 2.0kb upstream 2.0kb upstream 3971 true Chr05: 8519188-8523158 Phaseolus vulgaris
Phvul.005G060200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 8519188-8521187 Phaseolus vulgaris
Phvul.005G060200 2.0kb downstream 2.0kb downstream 3971 true Chr05: 8521188-8525158 Phaseolus vulgaris
Phvul.005G060200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 8523159-8525158 Phaseolus vulgaris
Phvul.005G060200 5.0kb upstream 5.0kb upstream 6971 true Chr05: 8516188-8523158 Phaseolus vulgaris
Phvul.005G060200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 8516188-8521187 Phaseolus vulgaris
Phvul.005G060200 5.0kb downstream 5.0kb downstream 6971 true Chr05: 8521188-8528158 Phaseolus vulgaris
Phvul.005G060200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 8523159-8528158 Phaseolus vulgaris
Phvul.005G060200 10.0kb upstream 10.0kb upstream 11971 true Chr05: 8511188-8523158 Phaseolus vulgaris
Phvul.005G060200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 8511188-8521187 Phaseolus vulgaris
Phvul.005G060200 10.0kb downstream 10.0kb downstream 11971 true Chr05: 8521188-8533158 Phaseolus vulgaris
Phvul.005G060200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 8523159-8533158 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306056 5265 Fabidae View MSA
124066139 5270 Rosid View MSA
123748045 5271 Pentapetalae View MSA
122792387 5272 Eudicot View MSA
122049179 5273 Angiosperm View MSA
121350118 5274 Embryophyte View MSA
123381585 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.826908 0.0 3.45032    
cufflinks 5.49179 0.0 19.5601   High
cufflinks 0.263314 0.0 1.22313 Low  
cufflinks 0.529437 0.0 2.31886 Low  
cufflinks 4.88856 0.0 17.6318   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0793007 0.0 0.424171 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain