Gene : Phvul.007G202600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22778:SF0 - OVARIAN CANCER-ASSOCIATED GENE 2 PROTEIN Genomic Order:  1884
Name:  ? Phvul.007G202600 Secondary Identifier:  ? PAC:37164675
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G202600 0.5kb upstream 0.5kb upstream 5915 true Chr07: 32556916-32562830 Phaseolus vulgaris
Phvul.007G202600 0.5kb upstream 0.5kb upstream 500 false Chr07: 32556916-32557415 Phaseolus vulgaris
Phvul.007G202600 0.5kb downstream 0.5kb downstream 5915 true Chr07: 32557416-32563330 Phaseolus vulgaris
Phvul.007G202600 0.5kb downstream 0.5kb downstream 500 false Chr07: 32562831-32563330 Phaseolus vulgaris
Phvul.007G202600 1.0kb upstream 1.0kb upstream 6415 true Chr07: 32556416-32562830 Phaseolus vulgaris
Phvul.007G202600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 32556416-32557415 Phaseolus vulgaris
Phvul.007G202600 1.0kb downstream 1.0kb downstream 6415 true Chr07: 32557416-32563830 Phaseolus vulgaris
Phvul.007G202600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 32562831-32563830 Phaseolus vulgaris
Phvul.007G202600 2.0kb upstream 2.0kb upstream 7415 true Chr07: 32555416-32562830 Phaseolus vulgaris
Phvul.007G202600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 32555416-32557415 Phaseolus vulgaris
Phvul.007G202600 2.0kb downstream 2.0kb downstream 7415 true Chr07: 32557416-32564830 Phaseolus vulgaris
Phvul.007G202600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 32562831-32564830 Phaseolus vulgaris
Phvul.007G202600 5.0kb upstream 5.0kb upstream 10415 true Chr07: 32552416-32562830 Phaseolus vulgaris
Phvul.007G202600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 32552416-32557415 Phaseolus vulgaris
Phvul.007G202600 5.0kb downstream 5.0kb downstream 10415 true Chr07: 32557416-32567830 Phaseolus vulgaris
Phvul.007G202600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 32562831-32567830 Phaseolus vulgaris
Phvul.007G202600 10.0kb upstream 10.0kb upstream 15415 true Chr07: 32547416-32562830 Phaseolus vulgaris
Phvul.007G202600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 32547416-32557415 Phaseolus vulgaris
Phvul.007G202600 10.0kb downstream 10.0kb downstream 15415 true Chr07: 32557416-32572830 Phaseolus vulgaris
Phvul.007G202600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 32562831-32572830 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306308 5265 Fabidae View MSA
124063987 5270 Rosid View MSA
123748273 5271 Pentapetalae View MSA
122787224 5272 Eudicot View MSA
122041526 5273 Angiosperm View MSA
121343974 5274 Embryophyte View MSA
123427771 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.60647 0.0 10.57   Low
cufflinks 6.9515 0.0 19.1232    
cufflinks 5.45926 0.0 15.3226    
cufflinks 4.6145 0.0 13.2154    
cufflinks 6.72391 0.0 18.5893    
cufflinks 4.78199 0.0 13.6135    
cufflinks 5.04278 0.0 14.2779    
cufflinks 6.04009 0.0 16.7751    
cufflinks 4.95198 0.0 14.0606    
cufflinks 8.46509 0.0 22.8736   High
cufflinks 5.90818 0.0 16.5327    

0 Strain