Gene : Phvul.005G065400 P. vulgaris v2.1
Genomic Order:  653 Name:  ? Phvul.005G065400
Secondary Identifier:  ? PAC:37153516
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G065400 0.5kb upstream 0.5kb upstream 4671 true Chr05: 10835946-10840616 Phaseolus vulgaris
Phvul.005G065400 0.5kb upstream 0.5kb upstream 500 false Chr05: 10840117-10840616 Phaseolus vulgaris
Phvul.005G065400 0.5kb downstream 0.5kb downstream 4671 true Chr05: 10835446-10840116 Phaseolus vulgaris
Phvul.005G065400 0.5kb downstream 0.5kb downstream 500 false Chr05: 10835446-10835945 Phaseolus vulgaris
Phvul.005G065400 1.0kb upstream 1.0kb upstream 5171 true Chr05: 10835946-10841116 Phaseolus vulgaris
Phvul.005G065400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 10840117-10841116 Phaseolus vulgaris
Phvul.005G065400 1.0kb downstream 1.0kb downstream 5171 true Chr05: 10834946-10840116 Phaseolus vulgaris
Phvul.005G065400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 10834946-10835945 Phaseolus vulgaris
Phvul.005G065400 2.0kb upstream 2.0kb upstream 6171 true Chr05: 10835946-10842116 Phaseolus vulgaris
Phvul.005G065400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 10840117-10842116 Phaseolus vulgaris
Phvul.005G065400 2.0kb downstream 2.0kb downstream 6171 true Chr05: 10833946-10840116 Phaseolus vulgaris
Phvul.005G065400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 10833946-10835945 Phaseolus vulgaris
Phvul.005G065400 5.0kb upstream 5.0kb upstream 9171 true Chr05: 10835946-10845116 Phaseolus vulgaris
Phvul.005G065400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 10840117-10845116 Phaseolus vulgaris
Phvul.005G065400 5.0kb downstream 5.0kb downstream 9171 true Chr05: 10830946-10840116 Phaseolus vulgaris
Phvul.005G065400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 10830946-10835945 Phaseolus vulgaris
Phvul.005G065400 10.0kb upstream 10.0kb upstream 14171 true Chr05: 10835946-10850116 Phaseolus vulgaris
Phvul.005G065400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 10840117-10850116 Phaseolus vulgaris
Phvul.005G065400 10.0kb downstream 10.0kb downstream 14171 true Chr05: 10825946-10840116 Phaseolus vulgaris
Phvul.005G065400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 10825946-10835945 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297314 5265 Fabidae View MSA
124060665 5270 Rosid View MSA
123748059 5271 Pentapetalae View MSA
122790792 5272 Eudicot View MSA
122048556 5273 Angiosperm View MSA
121311018 5274 Embryophyte View MSA
123348376 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.12682 0.0 14.2775    
cufflinks 5.71853 0.0 23.3819    
cufflinks 2.58932 0.0 12.3032    
cufflinks 2.92662 0.0 13.9386    
cufflinks 2.8781 0.0 11.3029    
cufflinks 6.25331 0.0 26.1149    
cufflinks 5.31787 0.0 18.8067    
cufflinks 9.53702 0.0 36.0463   High
cufflinks 3.64997 0.0 13.2589    
cufflinks 1.93216 0.0 8.25911   Low
cufflinks 4.37646 0.0 16.2628    

0 Strain