Gene : Phvul.005G065600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31969:SF9 - GEM-LIKE PROTEIN 2 Genomic Order:  655
Name:  ? Phvul.005G065600 Secondary Identifier:  ? PAC:37153527
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G065600 0.5kb upstream 0.5kb upstream 7638 true Chr05: 10859341-10866978 Phaseolus vulgaris
Phvul.005G065600 0.5kb upstream 0.5kb upstream 500 false Chr05: 10866479-10866978 Phaseolus vulgaris
Phvul.005G065600 0.5kb downstream 0.5kb downstream 7638 true Chr05: 10858841-10866478 Phaseolus vulgaris
Phvul.005G065600 0.5kb downstream 0.5kb downstream 500 false Chr05: 10858841-10859340 Phaseolus vulgaris
Phvul.005G065600 1.0kb upstream 1.0kb upstream 8138 true Chr05: 10859341-10867478 Phaseolus vulgaris
Phvul.005G065600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 10866479-10867478 Phaseolus vulgaris
Phvul.005G065600 1.0kb downstream 1.0kb downstream 8138 true Chr05: 10858341-10866478 Phaseolus vulgaris
Phvul.005G065600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 10858341-10859340 Phaseolus vulgaris
Phvul.005G065600 2.0kb upstream 2.0kb upstream 9138 true Chr05: 10859341-10868478 Phaseolus vulgaris
Phvul.005G065600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 10866479-10868478 Phaseolus vulgaris
Phvul.005G065600 2.0kb downstream 2.0kb downstream 9138 true Chr05: 10857341-10866478 Phaseolus vulgaris
Phvul.005G065600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 10857341-10859340 Phaseolus vulgaris
Phvul.005G065600 5.0kb upstream 5.0kb upstream 12138 true Chr05: 10859341-10871478 Phaseolus vulgaris
Phvul.005G065600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 10866479-10871478 Phaseolus vulgaris
Phvul.005G065600 5.0kb downstream 5.0kb downstream 12138 true Chr05: 10854341-10866478 Phaseolus vulgaris
Phvul.005G065600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 10854341-10859340 Phaseolus vulgaris
Phvul.005G065600 10.0kb upstream 10.0kb upstream 17138 true Chr05: 10859341-10876478 Phaseolus vulgaris
Phvul.005G065600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 10866479-10876478 Phaseolus vulgaris
Phvul.005G065600 10.0kb downstream 10.0kb downstream 17138 true Chr05: 10849341-10866478 Phaseolus vulgaris
Phvul.005G065600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 10849341-10859340 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306171 5265 Fabidae View MSA
124072428 5270 Rosid View MSA
123752568 5271 Pentapetalae View MSA
122797412 5272 Eudicot View MSA
122050342 5273 Angiosperm View MSA
121350470 5274 Embryophyte View MSA
123381748 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.84226 0.0 18.2818   High
cufflinks 3.4068 0.0 11.3625    
cufflinks 2.52241 0.0 8.6668    
cufflinks 3.5391 0.0 11.7771    
cufflinks 2.11455 0.0 7.50468    
cufflinks 0.30743 0.0 1.26797 Low Low
cufflinks 1.42877 0.0 5.22067    
cufflinks 0.8108 0.0 3.09193   Low
cufflinks 1.79241 0.0 6.41959    
cufflinks 4.99149 0.0 15.9912   High
cufflinks 2.10413 0.0 7.46669    

0 Strain