Gene : Phvul.007G207100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23423:SF17 - PROTEIN F40E10.6 Genomic Order:  1928
Name:  ? Phvul.007G207100 Secondary Identifier:  ? PAC:37165854
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G207100 0.5kb upstream 0.5kb upstream 4779 true Chr07: 32972943-32977721 Phaseolus vulgaris
Phvul.007G207100 0.5kb upstream 0.5kb upstream 500 false Chr07: 32977222-32977721 Phaseolus vulgaris
Phvul.007G207100 0.5kb downstream 0.5kb downstream 4779 true Chr07: 32972443-32977221 Phaseolus vulgaris
Phvul.007G207100 0.5kb downstream 0.5kb downstream 500 false Chr07: 32972443-32972942 Phaseolus vulgaris
Phvul.007G207100 1.0kb upstream 1.0kb upstream 5279 true Chr07: 32972943-32978221 Phaseolus vulgaris
Phvul.007G207100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 32977222-32978221 Phaseolus vulgaris
Phvul.007G207100 1.0kb downstream 1.0kb downstream 5279 true Chr07: 32971943-32977221 Phaseolus vulgaris
Phvul.007G207100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 32971943-32972942 Phaseolus vulgaris
Phvul.007G207100 2.0kb upstream 2.0kb upstream 6279 true Chr07: 32972943-32979221 Phaseolus vulgaris
Phvul.007G207100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 32977222-32979221 Phaseolus vulgaris
Phvul.007G207100 2.0kb downstream 2.0kb downstream 6279 true Chr07: 32970943-32977221 Phaseolus vulgaris
Phvul.007G207100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 32970943-32972942 Phaseolus vulgaris
Phvul.007G207100 5.0kb upstream 5.0kb upstream 9279 true Chr07: 32972943-32982221 Phaseolus vulgaris
Phvul.007G207100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 32977222-32982221 Phaseolus vulgaris
Phvul.007G207100 5.0kb downstream 5.0kb downstream 9279 true Chr07: 32967943-32977221 Phaseolus vulgaris
Phvul.007G207100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 32967943-32972942 Phaseolus vulgaris
Phvul.007G207100 10.0kb upstream 10.0kb upstream 14279 true Chr07: 32972943-32987221 Phaseolus vulgaris
Phvul.007G207100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 32977222-32987221 Phaseolus vulgaris
Phvul.007G207100 10.0kb downstream 10.0kb downstream 14279 true Chr07: 32962943-32977221 Phaseolus vulgaris
Phvul.007G207100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 32962943-32972942 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255164 5265 Fabidae View MSA
124062377 5270 Rosid View MSA
123741226 5271 Pentapetalae View MSA
122787885 5272 Eudicot View MSA
122045172 5273 Angiosperm View MSA
121348842 5274 Embryophyte View MSA
123427407 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.6643 0.0 33.5095    
cufflinks 13.4991 0.0 35.6458    
cufflinks 6.75597 0.0 18.8264   Low
cufflinks 17.0864 0.0 44.6312   High
cufflinks 14.566 0.0 38.3403    
cufflinks 10.0864 0.0 27.2055    
cufflinks 10.2042 0.0 27.5277    
cufflinks 10.2285 0.0 27.4888    
cufflinks 10.2379 0.0 27.7026    
cufflinks 13.8685 0.0 36.5254    
cufflinks 16.5391 0.0 43.2683   High

0 Strain