Gene : Phvul.005G068000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR33388:SF1 - F1K23.3 Genomic Order:  680
Name:  ? Phvul.005G068000 Secondary Identifier:  ? PAC:37152493
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G068000 0.5kb upstream 0.5kb upstream 4146 true Chr05: 11782679-11786824 Phaseolus vulgaris
Phvul.005G068000 0.5kb upstream 0.5kb upstream 500 false Chr05: 11782679-11783178 Phaseolus vulgaris
Phvul.005G068000 0.5kb downstream 0.5kb downstream 4146 true Chr05: 11783179-11787324 Phaseolus vulgaris
Phvul.005G068000 0.5kb downstream 0.5kb downstream 500 false Chr05: 11786825-11787324 Phaseolus vulgaris
Phvul.005G068000 1.0kb upstream 1.0kb upstream 4646 true Chr05: 11782179-11786824 Phaseolus vulgaris
Phvul.005G068000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 11782179-11783178 Phaseolus vulgaris
Phvul.005G068000 1.0kb downstream 1.0kb downstream 4646 true Chr05: 11783179-11787824 Phaseolus vulgaris
Phvul.005G068000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 11786825-11787824 Phaseolus vulgaris
Phvul.005G068000 2.0kb upstream 2.0kb upstream 5646 true Chr05: 11781179-11786824 Phaseolus vulgaris
Phvul.005G068000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 11781179-11783178 Phaseolus vulgaris
Phvul.005G068000 2.0kb downstream 2.0kb downstream 5646 true Chr05: 11783179-11788824 Phaseolus vulgaris
Phvul.005G068000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 11786825-11788824 Phaseolus vulgaris
Phvul.005G068000 5.0kb upstream 5.0kb upstream 8646 true Chr05: 11778179-11786824 Phaseolus vulgaris
Phvul.005G068000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 11778179-11783178 Phaseolus vulgaris
Phvul.005G068000 5.0kb downstream 5.0kb downstream 8646 true Chr05: 11783179-11791824 Phaseolus vulgaris
Phvul.005G068000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 11786825-11791824 Phaseolus vulgaris
Phvul.005G068000 10.0kb upstream 10.0kb upstream 13646 true Chr05: 11773179-11786824 Phaseolus vulgaris
Phvul.005G068000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 11773179-11783178 Phaseolus vulgaris
Phvul.005G068000 10.0kb downstream 10.0kb downstream 13646 true Chr05: 11783179-11796824 Phaseolus vulgaris
Phvul.005G068000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 11786825-11796824 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308261 5265 Fabidae View MSA
124072979 5270 Rosid View MSA
123749696 5271 Pentapetalae View MSA
122794097 5272 Eudicot View MSA
122049695 5273 Angiosperm View MSA
121311547 5274 Embryophyte View MSA
123348830 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.660402 0.0 3.79368   Low
cufflinks 1.05422 0.0 5.44059    
cufflinks 1.57101 0.0 7.15692    
cufflinks 1.83875 0.0 8.37902    
cufflinks 1.9242 0.0 8.65964    
cufflinks 1.73171 0.0 7.76556    
cufflinks 2.18472 0.0 9.26107    
cufflinks 1.28643 0.0 6.11575    
cufflinks 2.24029 0.0 9.46253    
cufflinks 2.51493 0.0 10.4437   High
cufflinks 1.22958 0.0 6.16671    

0 Strain