Gene : Phvul.005G067950 P. vulgaris v2.1
Defline:  (1 of 3) PTHR31072:SF3 - TRANSCRIPTION FACTOR TCP10-RELATED Genomic Order:  678
Name:  ? Phvul.005G067950 Secondary Identifier:  ? PAC:37152688
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G067950 0.5kb upstream 0.5kb upstream 2752 true Chr05: 11699489-11702240 Phaseolus vulgaris
Phvul.005G067950 0.5kb upstream 0.5kb upstream 500 false Chr05: 11699489-11699988 Phaseolus vulgaris
Phvul.005G067950 0.5kb downstream 0.5kb downstream 2752 true Chr05: 11699989-11702740 Phaseolus vulgaris
Phvul.005G067950 0.5kb downstream 0.5kb downstream 500 false Chr05: 11702241-11702740 Phaseolus vulgaris
Phvul.005G067950 1.0kb upstream 1.0kb upstream 3252 true Chr05: 11698989-11702240 Phaseolus vulgaris
Phvul.005G067950 1.0kb upstream 1.0kb upstream 1000 false Chr05: 11698989-11699988 Phaseolus vulgaris
Phvul.005G067950 1.0kb downstream 1.0kb downstream 3252 true Chr05: 11699989-11703240 Phaseolus vulgaris
Phvul.005G067950 1.0kb downstream 1.0kb downstream 1000 false Chr05: 11702241-11703240 Phaseolus vulgaris
Phvul.005G067950 2.0kb upstream 2.0kb upstream 4252 true Chr05: 11697989-11702240 Phaseolus vulgaris
Phvul.005G067950 2.0kb upstream 2.0kb upstream 2000 false Chr05: 11697989-11699988 Phaseolus vulgaris
Phvul.005G067950 2.0kb downstream 2.0kb downstream 4252 true Chr05: 11699989-11704240 Phaseolus vulgaris
Phvul.005G067950 2.0kb downstream 2.0kb downstream 2000 false Chr05: 11702241-11704240 Phaseolus vulgaris
Phvul.005G067950 5.0kb upstream 5.0kb upstream 7252 true Chr05: 11694989-11702240 Phaseolus vulgaris
Phvul.005G067950 5.0kb upstream 5.0kb upstream 5000 false Chr05: 11694989-11699988 Phaseolus vulgaris
Phvul.005G067950 5.0kb downstream 5.0kb downstream 7252 true Chr05: 11699989-11707240 Phaseolus vulgaris
Phvul.005G067950 5.0kb downstream 5.0kb downstream 5000 false Chr05: 11702241-11707240 Phaseolus vulgaris
Phvul.005G067950 10.0kb upstream 10.0kb upstream 12252 true Chr05: 11689989-11702240 Phaseolus vulgaris
Phvul.005G067950 10.0kb upstream 10.0kb upstream 10000 false Chr05: 11689989-11699988 Phaseolus vulgaris
Phvul.005G067950 10.0kb downstream 10.0kb downstream 12252 true Chr05: 11699989-11712240 Phaseolus vulgaris
Phvul.005G067950 10.0kb downstream 10.0kb downstream 10000 false Chr05: 11702241-11712240 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254749 5265 Fabidae View MSA
124070231 5270 Rosid View MSA
123742325 5271 Pentapetalae View MSA
122789743 5272 Eudicot View MSA
122046366 5273 Angiosperm View MSA
121350950 5274 Embryophyte View MSA
123381946 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.12968 0.0 11.4859   Low
cufflinks 17.6474 0.0 45.6438    
cufflinks 47.2907 0.0 128.768 High High
cufflinks 15.6476 0.0 40.4464    
cufflinks 4.27344 0.0 11.8234   Low
cufflinks 52.0093 0.0 143.715 High High
cufflinks 12.8603 0.0 33.2523    
cufflinks 7.55547 0.0 19.9724    
cufflinks 19.817 0.0 51.4639    
cufflinks 16.4605 0.0 42.5495    
cufflinks 4.56014 0.0 12.5315   Low

0 Strain