Gene : Phvul.005G051100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR33177:SF6 - F3O9.30 Genomic Order:  506
Name:  ? Phvul.005G051100 Secondary Identifier:  ? PAC:37154221
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G051100 0.5kb upstream 0.5kb upstream 2467 true Chr05: 6152163-6154629 Phaseolus vulgaris
Phvul.005G051100 0.5kb upstream 0.5kb upstream 500 false Chr05: 6152163-6152662 Phaseolus vulgaris
Phvul.005G051100 0.5kb downstream 0.5kb downstream 2467 true Chr05: 6152663-6155129 Phaseolus vulgaris
Phvul.005G051100 0.5kb downstream 0.5kb downstream 500 false Chr05: 6154630-6155129 Phaseolus vulgaris
Phvul.005G051100 1.0kb upstream 1.0kb upstream 2967 true Chr05: 6151663-6154629 Phaseolus vulgaris
Phvul.005G051100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 6151663-6152662 Phaseolus vulgaris
Phvul.005G051100 1.0kb downstream 1.0kb downstream 2967 true Chr05: 6152663-6155629 Phaseolus vulgaris
Phvul.005G051100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 6154630-6155629 Phaseolus vulgaris
Phvul.005G051100 2.0kb upstream 2.0kb upstream 3967 true Chr05: 6150663-6154629 Phaseolus vulgaris
Phvul.005G051100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 6150663-6152662 Phaseolus vulgaris
Phvul.005G051100 2.0kb downstream 2.0kb downstream 3967 true Chr05: 6152663-6156629 Phaseolus vulgaris
Phvul.005G051100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 6154630-6156629 Phaseolus vulgaris
Phvul.005G051100 5.0kb upstream 5.0kb upstream 6967 true Chr05: 6147663-6154629 Phaseolus vulgaris
Phvul.005G051100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 6147663-6152662 Phaseolus vulgaris
Phvul.005G051100 5.0kb downstream 5.0kb downstream 6967 true Chr05: 6152663-6159629 Phaseolus vulgaris
Phvul.005G051100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 6154630-6159629 Phaseolus vulgaris
Phvul.005G051100 10.0kb upstream 10.0kb upstream 11967 true Chr05: 6142663-6154629 Phaseolus vulgaris
Phvul.005G051100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 6142663-6152662 Phaseolus vulgaris
Phvul.005G051100 10.0kb downstream 10.0kb downstream 11967 true Chr05: 6152663-6164629 Phaseolus vulgaris
Phvul.005G051100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 6154630-6164629 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307261 5265 Fabidae View MSA
124061611 5270 Rosid View MSA
123748373 5271 Pentapetalae View MSA
122797765 5272 Eudicot View MSA
122050740 5273 Angiosperm View MSA
121350407 5274 Embryophyte View MSA
123381715 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 51.4587 0.0 133.015 High High
cufflinks 19.077 0.0 51.3025    
cufflinks 17.4279 0.0 47.1979    
cufflinks 25.2049 0.0 66.3425    
cufflinks 25.1115 0.0 66.4138    
cufflinks 23.5549 0.0 62.3684    
cufflinks 15.3632 0.0 41.9413    
cufflinks 13.4877 0.0 37.3286   Low
cufflinks 12.4766 0.0 34.6669   Low
cufflinks 43.979 0.0 113.753 High High
cufflinks 32.5603 0.0 84.843    

0 Strain