Gene : Phvul.005G051800 P. vulgaris v2.1
Defline:  (1 of 3) 1.1.3.15 - (S)-2-hydroxy-acid oxidase / Hydroxy-acid oxidase B Genomic Order:  512
Name:  ? Phvul.005G051800 Secondary Identifier:  ? PAC:37152917
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G051800 0.5kb upstream 0.5kb upstream 5334 true Chr05: 6669491-6674824 Phaseolus vulgaris
Phvul.005G051800 0.5kb upstream 0.5kb upstream 500 false Chr05: 6674325-6674824 Phaseolus vulgaris
Phvul.005G051800 0.5kb downstream 0.5kb downstream 5334 true Chr05: 6668991-6674324 Phaseolus vulgaris
Phvul.005G051800 0.5kb downstream 0.5kb downstream 500 false Chr05: 6668991-6669490 Phaseolus vulgaris
Phvul.005G051800 1.0kb upstream 1.0kb upstream 5834 true Chr05: 6669491-6675324 Phaseolus vulgaris
Phvul.005G051800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 6674325-6675324 Phaseolus vulgaris
Phvul.005G051800 1.0kb downstream 1.0kb downstream 5834 true Chr05: 6668491-6674324 Phaseolus vulgaris
Phvul.005G051800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 6668491-6669490 Phaseolus vulgaris
Phvul.005G051800 2.0kb upstream 2.0kb upstream 6834 true Chr05: 6669491-6676324 Phaseolus vulgaris
Phvul.005G051800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 6674325-6676324 Phaseolus vulgaris
Phvul.005G051800 2.0kb downstream 2.0kb downstream 6834 true Chr05: 6667491-6674324 Phaseolus vulgaris
Phvul.005G051800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 6667491-6669490 Phaseolus vulgaris
Phvul.005G051800 5.0kb upstream 5.0kb upstream 9834 true Chr05: 6669491-6679324 Phaseolus vulgaris
Phvul.005G051800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 6674325-6679324 Phaseolus vulgaris
Phvul.005G051800 5.0kb downstream 5.0kb downstream 9834 true Chr05: 6664491-6674324 Phaseolus vulgaris
Phvul.005G051800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 6664491-6669490 Phaseolus vulgaris
Phvul.005G051800 10.0kb upstream 10.0kb upstream 14834 true Chr05: 6669491-6684324 Phaseolus vulgaris
Phvul.005G051800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 6674325-6684324 Phaseolus vulgaris
Phvul.005G051800 10.0kb downstream 10.0kb downstream 14834 true Chr05: 6659491-6674324 Phaseolus vulgaris
Phvul.005G051800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 6659491-6669490 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300386 5265 Fabidae View MSA
124071344 5270 Rosid View MSA
123746733 5271 Pentapetalae View MSA
122791103 5272 Eudicot View MSA
122046790 5273 Angiosperm View MSA
121345614 5274 Embryophyte View MSA
123426843 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.1621 0.0 78.0377    
cufflinks 53.0843 0.0 140.958 High  
cufflinks 1954.82 0.0 10875.9 High High
cufflinks 32.781 0.0 84.9294    
cufflinks 141.999 0.0 414.698 High  
cufflinks 508.476 0.0 1931.54 High High
cufflinks 0.762985 0.0 2.68804   Low
cufflinks 0.387123 0.0 1.45061 Low Low
cufflinks 5.36501 0.0 15.1837    
cufflinks 179.733 0.0 545.261 High  
cufflinks 52.8509 0.0 139.922 High  

0 Strain