Gene : Phvul.007G192300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23315:SF119 - U-BOX DOMAIN-CONTAINING PROTEIN 3 Genomic Order:  1782
Name:  ? Phvul.007G192300 Secondary Identifier:  ? PAC:37164330
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7511 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G192300 0.5kb upstream 0.5kb upstream 5476 true Chr07: 31308499-31313974 Phaseolus vulgaris
Phvul.007G192300 0.5kb upstream 0.5kb upstream 500 false Chr07: 31313475-31313974 Phaseolus vulgaris
Phvul.007G192300 0.5kb downstream 0.5kb downstream 5476 true Chr07: 31307999-31313474 Phaseolus vulgaris
Phvul.007G192300 0.5kb downstream 0.5kb downstream 500 false Chr07: 31307999-31308498 Phaseolus vulgaris
Phvul.007G192300 1.0kb upstream 1.0kb upstream 5976 true Chr07: 31308499-31314474 Phaseolus vulgaris
Phvul.007G192300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 31313475-31314474 Phaseolus vulgaris
Phvul.007G192300 1.0kb downstream 1.0kb downstream 5976 true Chr07: 31307499-31313474 Phaseolus vulgaris
Phvul.007G192300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 31307499-31308498 Phaseolus vulgaris
Phvul.007G192300 2.0kb upstream 2.0kb upstream 6976 true Chr07: 31308499-31315474 Phaseolus vulgaris
Phvul.007G192300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 31313475-31315474 Phaseolus vulgaris
Phvul.007G192300 2.0kb downstream 2.0kb downstream 6976 true Chr07: 31306499-31313474 Phaseolus vulgaris
Phvul.007G192300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 31306499-31308498 Phaseolus vulgaris
Phvul.007G192300 5.0kb upstream 5.0kb upstream 9976 true Chr07: 31308499-31318474 Phaseolus vulgaris
Phvul.007G192300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 31313475-31318474 Phaseolus vulgaris
Phvul.007G192300 5.0kb downstream 5.0kb downstream 9976 true Chr07: 31303499-31313474 Phaseolus vulgaris
Phvul.007G192300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 31303499-31308498 Phaseolus vulgaris
Phvul.007G192300 10.0kb upstream 10.0kb upstream 14976 true Chr07: 31308499-31323474 Phaseolus vulgaris
Phvul.007G192300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 31313475-31323474 Phaseolus vulgaris
Phvul.007G192300 10.0kb downstream 10.0kb downstream 14976 true Chr07: 31298499-31313474 Phaseolus vulgaris
Phvul.007G192300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 31298499-31308498 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306105 5265 Fabidae View MSA
124067773 5270 Rosid View MSA
123748124 5271 Pentapetalae View MSA
122789337 5272 Eudicot View MSA
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.26597 0.0 11.8766   Low
cufflinks 8.97722 0.0 23.5746    
cufflinks 15.4552 0.0 39.9492   High
cufflinks 3.48363 0.0 9.96294   Low
cufflinks 10.5786 0.0 27.6708    
cufflinks 14.8438 0.0 38.3805   High
cufflinks 8.17011 0.0 21.5772    
cufflinks 7.28396 0.0 19.3162    
cufflinks 7.06833 0.0 18.879    
cufflinks 12.7724 0.0 33.0955    
cufflinks 12.4716 0.0 32.3822    

0 Strain