Gene : Phvul.007G194300 P. vulgaris v2.1
Defline:  (1 of 2) K17907 - autophagy-related protein 9 (ATG9) Genomic Order:  1802
Name:  ? Phvul.007G194300 Secondary Identifier:  ? PAC:37165354
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G194300 0.5kb upstream 0.5kb upstream 6275 true Chr07: 31618092-31624366 Phaseolus vulgaris
Phvul.007G194300 0.5kb upstream 0.5kb upstream 500 false Chr07: 31623867-31624366 Phaseolus vulgaris
Phvul.007G194300 0.5kb downstream 0.5kb downstream 6275 true Chr07: 31617592-31623866 Phaseolus vulgaris
Phvul.007G194300 0.5kb downstream 0.5kb downstream 500 false Chr07: 31617592-31618091 Phaseolus vulgaris
Phvul.007G194300 1.0kb upstream 1.0kb upstream 6775 true Chr07: 31618092-31624866 Phaseolus vulgaris
Phvul.007G194300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 31623867-31624866 Phaseolus vulgaris
Phvul.007G194300 1.0kb downstream 1.0kb downstream 6775 true Chr07: 31617092-31623866 Phaseolus vulgaris
Phvul.007G194300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 31617092-31618091 Phaseolus vulgaris
Phvul.007G194300 2.0kb upstream 2.0kb upstream 7775 true Chr07: 31618092-31625866 Phaseolus vulgaris
Phvul.007G194300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 31623867-31625866 Phaseolus vulgaris
Phvul.007G194300 2.0kb downstream 2.0kb downstream 7775 true Chr07: 31616092-31623866 Phaseolus vulgaris
Phvul.007G194300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 31616092-31618091 Phaseolus vulgaris
Phvul.007G194300 5.0kb upstream 5.0kb upstream 10775 true Chr07: 31618092-31628866 Phaseolus vulgaris
Phvul.007G194300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 31623867-31628866 Phaseolus vulgaris
Phvul.007G194300 5.0kb downstream 5.0kb downstream 10775 true Chr07: 31613092-31623866 Phaseolus vulgaris
Phvul.007G194300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 31613092-31618091 Phaseolus vulgaris
Phvul.007G194300 10.0kb upstream 10.0kb upstream 15775 true Chr07: 31618092-31633866 Phaseolus vulgaris
Phvul.007G194300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 31623867-31633866 Phaseolus vulgaris
Phvul.007G194300 10.0kb downstream 10.0kb downstream 15775 true Chr07: 31608092-31623866 Phaseolus vulgaris
Phvul.007G194300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 31608092-31618091 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309851 5265 Fabidae View MSA
124064260 5270 Rosid View MSA
123743706 5271 Pentapetalae View MSA
122786972 5272 Eudicot View MSA
122044754 5273 Angiosperm View MSA
121345191 5274 Embryophyte View MSA
123424941 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0894145 0.0 0.36621 Low  
cufflinks 0.0495029 0.0 0.214268 Low  
cufflinks 0.0870629 0.0 0.356822 Low  
cufflinks 0.129508 0.0 0.519222 Low High
cufflinks 0.023223 0.0 0.109045 Low Low
cufflinks 0.135458 0.0 0.538143 Low High
cufflinks 0.015048 0.0 0.0736977 Low Low
cufflinks 0.0314549 0.0 0.14167 Low  
cufflinks 0.0501616 0.0 0.217849 Low  
cufflinks 0.0895941 0.0 0.368077 Low  
cufflinks 0.0279053 0.0 0.128565 Low  

0 Strain