Gene : Phvul.007G193800 P. vulgaris v2.1
Defline:  (1 of 10) K14516 - ethylene-responsive transcription factor 1 (ERF1) Genomic Order:  1797
Name:  ? Phvul.007G193800 Secondary Identifier:  ? PAC:37164623
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G193800 0.5kb upstream 0.5kb upstream 1139 true Chr07: 31587861-31588999 Phaseolus vulgaris
Phvul.007G193800 0.5kb upstream 0.5kb upstream 500 false Chr07: 31588500-31588999 Phaseolus vulgaris
Phvul.007G193800 0.5kb downstream 0.5kb downstream 1139 true Chr07: 31587361-31588499 Phaseolus vulgaris
Phvul.007G193800 0.5kb downstream 0.5kb downstream 500 false Chr07: 31587361-31587860 Phaseolus vulgaris
Phvul.007G193800 1.0kb upstream 1.0kb upstream 1639 true Chr07: 31587861-31589499 Phaseolus vulgaris
Phvul.007G193800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 31588500-31589499 Phaseolus vulgaris
Phvul.007G193800 1.0kb downstream 1.0kb downstream 1639 true Chr07: 31586861-31588499 Phaseolus vulgaris
Phvul.007G193800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 31586861-31587860 Phaseolus vulgaris
Phvul.007G193800 2.0kb upstream 2.0kb upstream 2639 true Chr07: 31587861-31590499 Phaseolus vulgaris
Phvul.007G193800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 31588500-31590499 Phaseolus vulgaris
Phvul.007G193800 2.0kb downstream 2.0kb downstream 2639 true Chr07: 31585861-31588499 Phaseolus vulgaris
Phvul.007G193800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 31585861-31587860 Phaseolus vulgaris
Phvul.007G193800 5.0kb upstream 5.0kb upstream 5639 true Chr07: 31587861-31593499 Phaseolus vulgaris
Phvul.007G193800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 31588500-31593499 Phaseolus vulgaris
Phvul.007G193800 5.0kb downstream 5.0kb downstream 5639 true Chr07: 31582861-31588499 Phaseolus vulgaris
Phvul.007G193800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 31582861-31587860 Phaseolus vulgaris
Phvul.007G193800 10.0kb upstream 10.0kb upstream 10639 true Chr07: 31587861-31598499 Phaseolus vulgaris
Phvul.007G193800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 31588500-31598499 Phaseolus vulgaris
Phvul.007G193800 10.0kb downstream 10.0kb downstream 10639 true Chr07: 31577861-31588499 Phaseolus vulgaris
Phvul.007G193800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 31577861-31587860 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297843 5265 Fabidae View MSA
124040463 5270 Rosid View MSA
123747853 5271 Pentapetalae View MSA
122772336 5272 Eudicot View MSA
122046946 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.08165 0.0 4.11301    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.455195 0.0 1.84826 Low  
cufflinks 0.487661 0.0 1.97076    
cufflinks 0.070162 0.0 0.340788 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain