Gene : Phvul.007G193700 P. vulgaris v2.1
Defline:  (1 of 10) K14516 - ethylene-responsive transcription factor 1 (ERF1) Genomic Order:  1796
Name:  ? Phvul.007G193700 Secondary Identifier:  ? PAC:37166524
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G193700 0.5kb upstream 0.5kb upstream 1136 true Chr07: 31554975-31556110 Phaseolus vulgaris
Phvul.007G193700 0.5kb upstream 0.5kb upstream 500 false Chr07: 31555611-31556110 Phaseolus vulgaris
Phvul.007G193700 0.5kb downstream 0.5kb downstream 1136 true Chr07: 31554475-31555610 Phaseolus vulgaris
Phvul.007G193700 0.5kb downstream 0.5kb downstream 500 false Chr07: 31554475-31554974 Phaseolus vulgaris
Phvul.007G193700 1.0kb upstream 1.0kb upstream 1636 true Chr07: 31554975-31556610 Phaseolus vulgaris
Phvul.007G193700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 31555611-31556610 Phaseolus vulgaris
Phvul.007G193700 1.0kb downstream 1.0kb downstream 1636 true Chr07: 31553975-31555610 Phaseolus vulgaris
Phvul.007G193700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 31553975-31554974 Phaseolus vulgaris
Phvul.007G193700 2.0kb upstream 2.0kb upstream 2636 true Chr07: 31554975-31557610 Phaseolus vulgaris
Phvul.007G193700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 31555611-31557610 Phaseolus vulgaris
Phvul.007G193700 2.0kb downstream 2.0kb downstream 2636 true Chr07: 31552975-31555610 Phaseolus vulgaris
Phvul.007G193700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 31552975-31554974 Phaseolus vulgaris
Phvul.007G193700 5.0kb upstream 5.0kb upstream 5636 true Chr07: 31554975-31560610 Phaseolus vulgaris
Phvul.007G193700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 31555611-31560610 Phaseolus vulgaris
Phvul.007G193700 5.0kb downstream 5.0kb downstream 5636 true Chr07: 31549975-31555610 Phaseolus vulgaris
Phvul.007G193700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 31549975-31554974 Phaseolus vulgaris
Phvul.007G193700 10.0kb upstream 10.0kb upstream 10636 true Chr07: 31554975-31565610 Phaseolus vulgaris
Phvul.007G193700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 31555611-31565610 Phaseolus vulgaris
Phvul.007G193700 10.0kb downstream 10.0kb downstream 10636 true Chr07: 31544975-31555610 Phaseolus vulgaris
Phvul.007G193700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 31544975-31554974 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254093 5265 Fabidae View MSA
123996412 5270 Rosid View MSA
123570888 5271 Pentapetalae View MSA
122605621 5272 Eudicot View MSA
122046946 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.13251 0.0 10.7586   High
cufflinks 0.161884 0.0 0.720465 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.99353 0.0 3.78108    
cufflinks 0.928962 0.0 3.5563    
cufflinks 0.0665607 0.0 0.323296 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0587767 0.0 0.291594 Low Low

0 Strain