Gene : Phvul.005G054500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24115:SF339 - DI-GLUCOSE BINDING PROTEIN WITH KINESIN MOTOR DOMAIN Genomic Order:  540
Name:  ? Phvul.005G054500 Secondary Identifier:  ? PAC:37153874
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G054500 0.5kb upstream 0.5kb upstream 5690 true Chr05: 7148297-7153986 Phaseolus vulgaris
Phvul.005G054500 0.5kb upstream 0.5kb upstream 500 false Chr05: 7153487-7153986 Phaseolus vulgaris
Phvul.005G054500 0.5kb downstream 0.5kb downstream 5690 true Chr05: 7147797-7153486 Phaseolus vulgaris
Phvul.005G054500 0.5kb downstream 0.5kb downstream 500 false Chr05: 7147797-7148296 Phaseolus vulgaris
Phvul.005G054500 1.0kb upstream 1.0kb upstream 6190 true Chr05: 7148297-7154486 Phaseolus vulgaris
Phvul.005G054500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 7153487-7154486 Phaseolus vulgaris
Phvul.005G054500 1.0kb downstream 1.0kb downstream 6190 true Chr05: 7147297-7153486 Phaseolus vulgaris
Phvul.005G054500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 7147297-7148296 Phaseolus vulgaris
Phvul.005G054500 2.0kb upstream 2.0kb upstream 7190 true Chr05: 7148297-7155486 Phaseolus vulgaris
Phvul.005G054500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 7153487-7155486 Phaseolus vulgaris
Phvul.005G054500 2.0kb downstream 2.0kb downstream 7190 true Chr05: 7146297-7153486 Phaseolus vulgaris
Phvul.005G054500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 7146297-7148296 Phaseolus vulgaris
Phvul.005G054500 5.0kb upstream 5.0kb upstream 10190 true Chr05: 7148297-7158486 Phaseolus vulgaris
Phvul.005G054500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 7153487-7158486 Phaseolus vulgaris
Phvul.005G054500 5.0kb downstream 5.0kb downstream 10190 true Chr05: 7143297-7153486 Phaseolus vulgaris
Phvul.005G054500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 7143297-7148296 Phaseolus vulgaris
Phvul.005G054500 10.0kb upstream 10.0kb upstream 15190 true Chr05: 7148297-7163486 Phaseolus vulgaris
Phvul.005G054500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 7153487-7163486 Phaseolus vulgaris
Phvul.005G054500 10.0kb downstream 10.0kb downstream 15190 true Chr05: 7138297-7153486 Phaseolus vulgaris
Phvul.005G054500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 7138297-7148296 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041439 5273 Angiosperm View MSA
122305131 5265 Fabidae View MSA
124062464 5270 Rosid View MSA
123748545 5271 Pentapetalae View MSA
122794384 5272 Eudicot View MSA
123429039 5275 Viridiplantae View MSA
121349532 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.09707 0.0 3.3768    
cufflinks 8.03615 0.0 20.8441    
cufflinks 1.37235 0.0 4.09861    
cufflinks 0.841815 0.0 2.69919    
cufflinks 3.47308 0.0 9.55667    
cufflinks 9.49364 0.0 24.5502    
cufflinks 6.45003 0.0 16.8278    
cufflinks 3.90276 0.0 10.4936    
cufflinks 5.90003 0.0 15.472    
cufflinks 0.082761 0.0 0.328575 Low Low
cufflinks 3.99443 0.0 10.8224    

0 Strain