Gene : Phvul.005G054680 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11802:SF66 - SERINE CARBOXYPEPTIDASE-LIKE 36-RELATED Genomic Order:  640
Name:  ? Phvul.005G054680 Secondary Identifier:  ? PAC:37153353
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G054680 0.5kb upstream 0.5kb upstream 5154 true Chr05: 10240037-10245190 Phaseolus vulgaris
Phvul.005G054680 0.5kb upstream 0.5kb upstream 500 false Chr05: 10240037-10240536 Phaseolus vulgaris
Phvul.005G054680 0.5kb downstream 0.5kb downstream 5154 true Chr05: 10240537-10245690 Phaseolus vulgaris
Phvul.005G054680 0.5kb downstream 0.5kb downstream 500 false Chr05: 10245191-10245690 Phaseolus vulgaris
Phvul.005G054680 1.0kb upstream 1.0kb upstream 5654 true Chr05: 10239537-10245190 Phaseolus vulgaris
Phvul.005G054680 1.0kb upstream 1.0kb upstream 1000 false Chr05: 10239537-10240536 Phaseolus vulgaris
Phvul.005G054680 1.0kb downstream 1.0kb downstream 5654 true Chr05: 10240537-10246190 Phaseolus vulgaris
Phvul.005G054680 1.0kb downstream 1.0kb downstream 1000 false Chr05: 10245191-10246190 Phaseolus vulgaris
Phvul.005G054680 2.0kb upstream 2.0kb upstream 6654 true Chr05: 10238537-10245190 Phaseolus vulgaris
Phvul.005G054680 2.0kb upstream 2.0kb upstream 2000 false Chr05: 10238537-10240536 Phaseolus vulgaris
Phvul.005G054680 2.0kb downstream 2.0kb downstream 6654 true Chr05: 10240537-10247190 Phaseolus vulgaris
Phvul.005G054680 2.0kb downstream 2.0kb downstream 2000 false Chr05: 10245191-10247190 Phaseolus vulgaris
Phvul.005G054680 5.0kb upstream 5.0kb upstream 9654 true Chr05: 10235537-10245190 Phaseolus vulgaris
Phvul.005G054680 5.0kb upstream 5.0kb upstream 5000 false Chr05: 10235537-10240536 Phaseolus vulgaris
Phvul.005G054680 5.0kb downstream 5.0kb downstream 9654 true Chr05: 10240537-10250190 Phaseolus vulgaris
Phvul.005G054680 5.0kb downstream 5.0kb downstream 5000 false Chr05: 10245191-10250190 Phaseolus vulgaris
Phvul.005G054680 10.0kb upstream 10.0kb upstream 14654 true Chr05: 10230537-10245190 Phaseolus vulgaris
Phvul.005G054680 10.0kb upstream 10.0kb upstream 10000 false Chr05: 10230537-10240536 Phaseolus vulgaris
Phvul.005G054680 10.0kb downstream 10.0kb downstream 14654 true Chr05: 10240537-10255190 Phaseolus vulgaris
Phvul.005G054680 10.0kb downstream 10.0kb downstream 10000 false Chr05: 10245191-10255190 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313340 5265 Fabidae View MSA
124070950 5270 Rosid View MSA
123753218 5271 Pentapetalae View MSA
122797731 5272 Eudicot View MSA
122048789 5273 Angiosperm View MSA
121311114 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0279135 0.0 0.136707 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain