Gene : Phvul.005G054800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10358//PTHR10358:SF7 - ENDOSULFINE // SUBFAMILY NOT NAMED Genomic Order:  543
Name:  ? Phvul.005G054800 Secondary Identifier:  ? PAC:37154234
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G054800 0.5kb upstream 0.5kb upstream 4558 true Chr05: 7195518-7200075 Phaseolus vulgaris
Phvul.005G054800 0.5kb upstream 0.5kb upstream 500 false Chr05: 7199576-7200075 Phaseolus vulgaris
Phvul.005G054800 0.5kb downstream 0.5kb downstream 4558 true Chr05: 7195018-7199575 Phaseolus vulgaris
Phvul.005G054800 0.5kb downstream 0.5kb downstream 500 false Chr05: 7195018-7195517 Phaseolus vulgaris
Phvul.005G054800 1.0kb upstream 1.0kb upstream 5058 true Chr05: 7195518-7200575 Phaseolus vulgaris
Phvul.005G054800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 7199576-7200575 Phaseolus vulgaris
Phvul.005G054800 1.0kb downstream 1.0kb downstream 5058 true Chr05: 7194518-7199575 Phaseolus vulgaris
Phvul.005G054800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 7194518-7195517 Phaseolus vulgaris
Phvul.005G054800 2.0kb upstream 2.0kb upstream 6058 true Chr05: 7195518-7201575 Phaseolus vulgaris
Phvul.005G054800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 7199576-7201575 Phaseolus vulgaris
Phvul.005G054800 2.0kb downstream 2.0kb downstream 6058 true Chr05: 7193518-7199575 Phaseolus vulgaris
Phvul.005G054800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 7193518-7195517 Phaseolus vulgaris
Phvul.005G054800 5.0kb upstream 5.0kb upstream 9058 true Chr05: 7195518-7204575 Phaseolus vulgaris
Phvul.005G054800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 7199576-7204575 Phaseolus vulgaris
Phvul.005G054800 5.0kb downstream 5.0kb downstream 9058 true Chr05: 7190518-7199575 Phaseolus vulgaris
Phvul.005G054800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 7190518-7195517 Phaseolus vulgaris
Phvul.005G054800 10.0kb upstream 10.0kb upstream 14058 true Chr05: 7195518-7209575 Phaseolus vulgaris
Phvul.005G054800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 7199576-7209575 Phaseolus vulgaris
Phvul.005G054800 10.0kb downstream 10.0kb downstream 14058 true Chr05: 7185518-7199575 Phaseolus vulgaris
Phvul.005G054800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 7185518-7195517 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302265 5265 Fabidae View MSA
124064280 5270 Rosid View MSA
123751863 5271 Pentapetalae View MSA
122795534 5272 Eudicot View MSA
122049518 5273 Angiosperm View MSA
121345804 5274 Embryophyte View MSA
123427885 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.8788 0.0 129.243 High  
cufflinks 45.9656 0.0 147.807 High  
cufflinks 31.172 0.0 102.338   Low
cufflinks 58.945 0.0 189.092 High  
cufflinks 47.2723 0.0 152.098 High  
cufflinks 18.8534 0.0 66.1571   Low
cufflinks 54.7188 0.0 176.556 High  
cufflinks 46.6079 0.0 150.141 High  
cufflinks 56.4965 0.0 181.889 High  
cufflinks 55.1004 0.0 176.376 High  
cufflinks 54.8694 0.0 176.509 High  

0 Strain