Gene : Phvul.005G057900 P. vulgaris v2.1
Defline:  (1 of 1) 2.4.1.142 - Chitobiosyldiphosphodolichol beta-mannosyltransferase / mannosyltransferase Genomic Order:  573
Name:  ? Phvul.005G057900 Secondary Identifier:  ? PAC:37152641
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G057900 0.5kb upstream 0.5kb upstream 9968 true Chr05: 7792743-7802710 Phaseolus vulgaris
Phvul.005G057900 0.5kb upstream 0.5kb upstream 500 false Chr05: 7792743-7793242 Phaseolus vulgaris
Phvul.005G057900 0.5kb downstream 0.5kb downstream 9968 true Chr05: 7793243-7803210 Phaseolus vulgaris
Phvul.005G057900 0.5kb downstream 0.5kb downstream 500 false Chr05: 7802711-7803210 Phaseolus vulgaris
Phvul.005G057900 1.0kb upstream 1.0kb upstream 10468 true Chr05: 7792243-7802710 Phaseolus vulgaris
Phvul.005G057900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 7792243-7793242 Phaseolus vulgaris
Phvul.005G057900 1.0kb downstream 1.0kb downstream 10468 true Chr05: 7793243-7803710 Phaseolus vulgaris
Phvul.005G057900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 7802711-7803710 Phaseolus vulgaris
Phvul.005G057900 2.0kb upstream 2.0kb upstream 11468 true Chr05: 7791243-7802710 Phaseolus vulgaris
Phvul.005G057900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 7791243-7793242 Phaseolus vulgaris
Phvul.005G057900 2.0kb downstream 2.0kb downstream 11468 true Chr05: 7793243-7804710 Phaseolus vulgaris
Phvul.005G057900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 7802711-7804710 Phaseolus vulgaris
Phvul.005G057900 5.0kb upstream 5.0kb upstream 14468 true Chr05: 7788243-7802710 Phaseolus vulgaris
Phvul.005G057900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 7788243-7793242 Phaseolus vulgaris
Phvul.005G057900 5.0kb downstream 5.0kb downstream 14468 true Chr05: 7793243-7807710 Phaseolus vulgaris
Phvul.005G057900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 7802711-7807710 Phaseolus vulgaris
Phvul.005G057900 10.0kb upstream 10.0kb upstream 19468 true Chr05: 7783243-7802710 Phaseolus vulgaris
Phvul.005G057900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 7783243-7793242 Phaseolus vulgaris
Phvul.005G057900 10.0kb downstream 10.0kb downstream 19468 true Chr05: 7793243-7812710 Phaseolus vulgaris
Phvul.005G057900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 7802711-7812710 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304345 5265 Fabidae View MSA
124066723 5270 Rosid View MSA
123740447 5271 Pentapetalae View MSA
122785906 5272 Eudicot View MSA
122046211 5273 Angiosperm View MSA
123429023 5275 Viridiplantae View MSA
121347340 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.98888 0.0 12.1778   Low
cufflinks 4.43835 0.0 14.8066    
cufflinks 4.30946 0.0 14.3146    
cufflinks 4.59912 0.0 13.8926    
cufflinks 4.9131 0.0 16.2026    
cufflinks 4.5834 0.0 15.3584    
cufflinks 5.00894 0.0 16.5423    
cufflinks 5.41675 0.0 17.2624    
cufflinks 4.5744 0.0 15.3963    
cufflinks 6.07296 0.0 19.001   High
cufflinks 5.4409 0.0 17.7819   High

0 Strain