Gene : Phvul.005G057800 P. vulgaris v2.1
Defline:  (1 of 1) K13728 - mitotic spindle assembly checkpoint protein MAD2B (MAD2L2) Genomic Order:  572
Name:  ? Phvul.005G057800 Secondary Identifier:  ? PAC:37153430
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G057800 0.5kb upstream 0.5kb upstream 4064 true Chr05: 7789915-7793978 Phaseolus vulgaris
Phvul.005G057800 0.5kb upstream 0.5kb upstream 500 false Chr05: 7793479-7793978 Phaseolus vulgaris
Phvul.005G057800 0.5kb downstream 0.5kb downstream 4064 true Chr05: 7789415-7793478 Phaseolus vulgaris
Phvul.005G057800 0.5kb downstream 0.5kb downstream 500 false Chr05: 7789415-7789914 Phaseolus vulgaris
Phvul.005G057800 1.0kb upstream 1.0kb upstream 4564 true Chr05: 7789915-7794478 Phaseolus vulgaris
Phvul.005G057800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 7793479-7794478 Phaseolus vulgaris
Phvul.005G057800 1.0kb downstream 1.0kb downstream 4564 true Chr05: 7788915-7793478 Phaseolus vulgaris
Phvul.005G057800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 7788915-7789914 Phaseolus vulgaris
Phvul.005G057800 2.0kb upstream 2.0kb upstream 5564 true Chr05: 7789915-7795478 Phaseolus vulgaris
Phvul.005G057800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 7793479-7795478 Phaseolus vulgaris
Phvul.005G057800 2.0kb downstream 2.0kb downstream 5564 true Chr05: 7787915-7793478 Phaseolus vulgaris
Phvul.005G057800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 7787915-7789914 Phaseolus vulgaris
Phvul.005G057800 5.0kb upstream 5.0kb upstream 8564 true Chr05: 7789915-7798478 Phaseolus vulgaris
Phvul.005G057800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 7793479-7798478 Phaseolus vulgaris
Phvul.005G057800 5.0kb downstream 5.0kb downstream 8564 true Chr05: 7784915-7793478 Phaseolus vulgaris
Phvul.005G057800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 7784915-7789914 Phaseolus vulgaris
Phvul.005G057800 10.0kb upstream 10.0kb upstream 13564 true Chr05: 7789915-7803478 Phaseolus vulgaris
Phvul.005G057800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 7793479-7803478 Phaseolus vulgaris
Phvul.005G057800 10.0kb downstream 10.0kb downstream 13564 true Chr05: 7779915-7793478 Phaseolus vulgaris
Phvul.005G057800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 7779915-7789914 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026425 5273 Angiosperm View MSA
122306646 5265 Fabidae View MSA
124066522 5270 Rosid View MSA
123738091 5271 Pentapetalae View MSA
122790460 5272 Eudicot View MSA
121345538 5274 Embryophyte View MSA
123425576 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.71686 0.0 31.59   High
cufflinks 1.54543 0.0 30.18    
cufflinks 1.27255 0.0 29.7381    
cufflinks 2.67848 0.0 34.4825   High
cufflinks 1.45729 0.0 32.1673    
cufflinks 0.710141 0.0 6.00609   Low
cufflinks 1.2442 0.0 31.3006    
cufflinks 1.65713 0.0 33.6766    
cufflinks 1.19959 0.0 29.6591    
cufflinks 2.47396 0.0 38.8008   High
cufflinks 1.50248 0.0 34.0015    

0 Strain