Gene : Phvul.007G198700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13832//PTHR13832:SF276 - PROTEIN PHOSPHATASE 2C // SUBFAMILY NOT NAMED Genomic Order:  1845
Name:  ? Phvul.007G198700 Secondary Identifier:  ? PAC:37167473
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G198700 0.5kb upstream 0.5kb upstream 3763 true Chr07: 32199147-32202909 Phaseolus vulgaris
Phvul.007G198700 0.5kb upstream 0.5kb upstream 500 false Chr07: 32199147-32199646 Phaseolus vulgaris
Phvul.007G198700 0.5kb downstream 0.5kb downstream 3763 true Chr07: 32199647-32203409 Phaseolus vulgaris
Phvul.007G198700 0.5kb downstream 0.5kb downstream 500 false Chr07: 32202910-32203409 Phaseolus vulgaris
Phvul.007G198700 1.0kb upstream 1.0kb upstream 4263 true Chr07: 32198647-32202909 Phaseolus vulgaris
Phvul.007G198700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 32198647-32199646 Phaseolus vulgaris
Phvul.007G198700 1.0kb downstream 1.0kb downstream 4263 true Chr07: 32199647-32203909 Phaseolus vulgaris
Phvul.007G198700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 32202910-32203909 Phaseolus vulgaris
Phvul.007G198700 2.0kb upstream 2.0kb upstream 5263 true Chr07: 32197647-32202909 Phaseolus vulgaris
Phvul.007G198700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 32197647-32199646 Phaseolus vulgaris
Phvul.007G198700 2.0kb downstream 2.0kb downstream 5263 true Chr07: 32199647-32204909 Phaseolus vulgaris
Phvul.007G198700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 32202910-32204909 Phaseolus vulgaris
Phvul.007G198700 5.0kb upstream 5.0kb upstream 8263 true Chr07: 32194647-32202909 Phaseolus vulgaris
Phvul.007G198700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 32194647-32199646 Phaseolus vulgaris
Phvul.007G198700 5.0kb downstream 5.0kb downstream 8263 true Chr07: 32199647-32207909 Phaseolus vulgaris
Phvul.007G198700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 32202910-32207909 Phaseolus vulgaris
Phvul.007G198700 10.0kb upstream 10.0kb upstream 13263 true Chr07: 32189647-32202909 Phaseolus vulgaris
Phvul.007G198700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 32189647-32199646 Phaseolus vulgaris
Phvul.007G198700 10.0kb downstream 10.0kb downstream 13263 true Chr07: 32199647-32212909 Phaseolus vulgaris
Phvul.007G198700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 32202910-32212909 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309783 5265 Fabidae View MSA
124065927 5270 Rosid View MSA
123753048 5271 Pentapetalae View MSA
122797893 5272 Eudicot View MSA
122041990 5273 Angiosperm View MSA
121309911 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.42788 0.0 15.266    
cufflinks 8.38672 0.0 22.6809    
cufflinks 26.4174 0.0 68.3513   High
cufflinks 5.77322 0.0 16.205    
cufflinks 16.3095 0.0 42.4576    
cufflinks 17.8153 0.0 46.1725    
cufflinks 1.30235 0.0 4.26295   Low
cufflinks 2.54692 0.0 7.724    
cufflinks 1.24049 0.0 4.08569   Low
cufflinks 4.28037 0.0 12.3449    
cufflinks 20.5379 0.0 53.1254   High

0 Strain