Gene : Phvul.007G197300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22937//PTHR22937:SF37 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1831
Name:  ? Phvul.007G197300 Secondary Identifier:  ? PAC:37167578
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G197300 0.5kb upstream 0.5kb upstream 11074 true Chr07: 32054381-32065454 Phaseolus vulgaris
Phvul.007G197300 0.5kb upstream 0.5kb upstream 500 false Chr07: 32054381-32054880 Phaseolus vulgaris
Phvul.007G197300 0.5kb downstream 0.5kb downstream 11074 true Chr07: 32054881-32065954 Phaseolus vulgaris
Phvul.007G197300 0.5kb downstream 0.5kb downstream 500 false Chr07: 32065455-32065954 Phaseolus vulgaris
Phvul.007G197300 1.0kb upstream 1.0kb upstream 11574 true Chr07: 32053881-32065454 Phaseolus vulgaris
Phvul.007G197300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 32053881-32054880 Phaseolus vulgaris
Phvul.007G197300 1.0kb downstream 1.0kb downstream 11574 true Chr07: 32054881-32066454 Phaseolus vulgaris
Phvul.007G197300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 32065455-32066454 Phaseolus vulgaris
Phvul.007G197300 2.0kb upstream 2.0kb upstream 12574 true Chr07: 32052881-32065454 Phaseolus vulgaris
Phvul.007G197300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 32052881-32054880 Phaseolus vulgaris
Phvul.007G197300 2.0kb downstream 2.0kb downstream 12574 true Chr07: 32054881-32067454 Phaseolus vulgaris
Phvul.007G197300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 32065455-32067454 Phaseolus vulgaris
Phvul.007G197300 5.0kb upstream 5.0kb upstream 15574 true Chr07: 32049881-32065454 Phaseolus vulgaris
Phvul.007G197300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 32049881-32054880 Phaseolus vulgaris
Phvul.007G197300 5.0kb downstream 5.0kb downstream 15574 true Chr07: 32054881-32070454 Phaseolus vulgaris
Phvul.007G197300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 32065455-32070454 Phaseolus vulgaris
Phvul.007G197300 10.0kb upstream 10.0kb upstream 20574 true Chr07: 32044881-32065454 Phaseolus vulgaris
Phvul.007G197300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 32044881-32054880 Phaseolus vulgaris
Phvul.007G197300 10.0kb downstream 10.0kb downstream 20574 true Chr07: 32054881-32075454 Phaseolus vulgaris
Phvul.007G197300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 32065455-32075454 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300447 5265 Fabidae View MSA
124062493 5270 Rosid View MSA
123751075 5271 Pentapetalae View MSA
122793020 5272 Eudicot View MSA
122049263 5273 Angiosperm View MSA
121311321 5274 Embryophyte View MSA
123348631 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.7371 0.0 90.4984 High  
cufflinks 32.8469 0.0 85.3732 High  
cufflinks 34.4099 0.0 89.5901    
cufflinks 43.9016 0.0 115.611 High High
cufflinks 39.5381 0.0 103.349 High  
cufflinks 31.6318 0.0 82.1238   Low
cufflinks 34.442 0.0 89.7253 High  
cufflinks 29.1384 0.0 75.549 High Low
cufflinks 42.5216 0.0 111.775 High  
cufflinks 45.7406 0.0 120.785 High High
cufflinks 43.7254 0.0 114.961 High High

0 Strain