Gene : Phvul.005G056800 P. vulgaris v2.1
Genomic Order:  562 Name:  ? Phvul.005G056800
Secondary Identifier:  ? PAC:37154212
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G056800 0.5kb upstream 0.5kb upstream 5667 true Chr05: 7571551-7577217 Phaseolus vulgaris
Phvul.005G056800 0.5kb upstream 0.5kb upstream 500 false Chr05: 7571551-7572050 Phaseolus vulgaris
Phvul.005G056800 0.5kb downstream 0.5kb downstream 5667 true Chr05: 7572051-7577717 Phaseolus vulgaris
Phvul.005G056800 0.5kb downstream 0.5kb downstream 500 false Chr05: 7577218-7577717 Phaseolus vulgaris
Phvul.005G056800 1.0kb upstream 1.0kb upstream 6167 true Chr05: 7571051-7577217 Phaseolus vulgaris
Phvul.005G056800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 7571051-7572050 Phaseolus vulgaris
Phvul.005G056800 1.0kb downstream 1.0kb downstream 6167 true Chr05: 7572051-7578217 Phaseolus vulgaris
Phvul.005G056800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 7577218-7578217 Phaseolus vulgaris
Phvul.005G056800 2.0kb upstream 2.0kb upstream 7167 true Chr05: 7570051-7577217 Phaseolus vulgaris
Phvul.005G056800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 7570051-7572050 Phaseolus vulgaris
Phvul.005G056800 2.0kb downstream 2.0kb downstream 7167 true Chr05: 7572051-7579217 Phaseolus vulgaris
Phvul.005G056800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 7577218-7579217 Phaseolus vulgaris
Phvul.005G056800 5.0kb upstream 5.0kb upstream 10167 true Chr05: 7567051-7577217 Phaseolus vulgaris
Phvul.005G056800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 7567051-7572050 Phaseolus vulgaris
Phvul.005G056800 5.0kb downstream 5.0kb downstream 10167 true Chr05: 7572051-7582217 Phaseolus vulgaris
Phvul.005G056800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 7577218-7582217 Phaseolus vulgaris
Phvul.005G056800 10.0kb upstream 10.0kb upstream 15167 true Chr05: 7562051-7577217 Phaseolus vulgaris
Phvul.005G056800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 7562051-7572050 Phaseolus vulgaris
Phvul.005G056800 10.0kb downstream 10.0kb downstream 15167 true Chr05: 7572051-7587217 Phaseolus vulgaris
Phvul.005G056800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 7577218-7587217 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299380 5265 Fabidae View MSA
124069914 5270 Rosid View MSA
123749544 5271 Pentapetalae View MSA
122793000 5272 Eudicot View MSA
122042486 5273 Angiosperm View MSA
121345558 5274 Embryophyte View MSA
123380236 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.7514 0.0 28.1533   Low
cufflinks 28.192 0.0 73.5334   High
cufflinks 16.4564 0.0 42.5481    
cufflinks 14.6281 0.0 37.9273   Low
cufflinks 26.4959 0.0 68.8456    
cufflinks 17.3507 0.0 44.852    
cufflinks 21.7379 0.0 56.2851    
cufflinks 21.3973 0.0 55.4082    
cufflinks 19.995 0.0 51.7049    
cufflinks 29.0898 0.0 75.9109   High
cufflinks 27.5744 0.0 71.7582    

0 Strain