Gene : Phvul.007G184600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23257//PTHR23257:SF335 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED Genomic Order:  1707
Name:  ? Phvul.007G184600 Secondary Identifier:  ? PAC:37166949
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G184600 0.5kb upstream 0.5kb upstream 9808 true Chr07: 30424332-30434139 Phaseolus vulgaris
Phvul.007G184600 0.5kb upstream 0.5kb upstream 500 false Chr07: 30433640-30434139 Phaseolus vulgaris
Phvul.007G184600 0.5kb downstream 0.5kb downstream 9808 true Chr07: 30423832-30433639 Phaseolus vulgaris
Phvul.007G184600 0.5kb downstream 0.5kb downstream 500 false Chr07: 30423832-30424331 Phaseolus vulgaris
Phvul.007G184600 1.0kb upstream 1.0kb upstream 10308 true Chr07: 30424332-30434639 Phaseolus vulgaris
Phvul.007G184600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 30433640-30434639 Phaseolus vulgaris
Phvul.007G184600 1.0kb downstream 1.0kb downstream 10308 true Chr07: 30423332-30433639 Phaseolus vulgaris
Phvul.007G184600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 30423332-30424331 Phaseolus vulgaris
Phvul.007G184600 2.0kb upstream 2.0kb upstream 11308 true Chr07: 30424332-30435639 Phaseolus vulgaris
Phvul.007G184600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 30433640-30435639 Phaseolus vulgaris
Phvul.007G184600 2.0kb downstream 2.0kb downstream 11308 true Chr07: 30422332-30433639 Phaseolus vulgaris
Phvul.007G184600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 30422332-30424331 Phaseolus vulgaris
Phvul.007G184600 5.0kb upstream 5.0kb upstream 14308 true Chr07: 30424332-30438639 Phaseolus vulgaris
Phvul.007G184600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 30433640-30438639 Phaseolus vulgaris
Phvul.007G184600 5.0kb downstream 5.0kb downstream 14308 true Chr07: 30419332-30433639 Phaseolus vulgaris
Phvul.007G184600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 30419332-30424331 Phaseolus vulgaris
Phvul.007G184600 10.0kb upstream 10.0kb upstream 19308 true Chr07: 30424332-30443639 Phaseolus vulgaris
Phvul.007G184600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 30433640-30443639 Phaseolus vulgaris
Phvul.007G184600 10.0kb downstream 10.0kb downstream 19308 true Chr07: 30414332-30433639 Phaseolus vulgaris
Phvul.007G184600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 30414332-30424331 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309694 5265 Fabidae View MSA
124069123 5270 Rosid View MSA
123738412 5271 Pentapetalae View MSA
122795916 5272 Eudicot View MSA
122044929 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121347926 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.14246 0.0 23.7193    
cufflinks 8.05484 0.0 20.9875    
cufflinks 10.4737 0.0 27.1025    
cufflinks 4.49728 0.0 12.2225   Low
cufflinks 10.4665 0.0 27.1053    
cufflinks 8.97212 0.0 23.288    
cufflinks 11.9947 0.0 31.0041    
cufflinks 11.0955 0.0 28.6829    
cufflinks 11.8573 0.0 30.6506    
cufflinks 24.2125 0.0 63.9228   High
cufflinks 8.89816 0.0 23.1224    

0 Strain