Gene : Phvul.005G042400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23070//PTHR23070:SF43 - BCS1 AAA-TYPE ATPASE // SUBFAMILY NOT NAMED Genomic Order:  421
Name:  ? Phvul.005G042400 Secondary Identifier:  ? PAC:37153422
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G042400 0.5kb upstream 0.5kb upstream 2057 true Chr05: 4323360-4325416 Phaseolus vulgaris
Phvul.005G042400 0.5kb upstream 0.5kb upstream 500 false Chr05: 4323360-4323859 Phaseolus vulgaris
Phvul.005G042400 0.5kb downstream 0.5kb downstream 2057 true Chr05: 4323860-4325916 Phaseolus vulgaris
Phvul.005G042400 0.5kb downstream 0.5kb downstream 500 false Chr05: 4325417-4325916 Phaseolus vulgaris
Phvul.005G042400 1.0kb upstream 1.0kb upstream 2557 true Chr05: 4322860-4325416 Phaseolus vulgaris
Phvul.005G042400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 4322860-4323859 Phaseolus vulgaris
Phvul.005G042400 1.0kb downstream 1.0kb downstream 2557 true Chr05: 4323860-4326416 Phaseolus vulgaris
Phvul.005G042400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 4325417-4326416 Phaseolus vulgaris
Phvul.005G042400 2.0kb upstream 2.0kb upstream 3557 true Chr05: 4321860-4325416 Phaseolus vulgaris
Phvul.005G042400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 4321860-4323859 Phaseolus vulgaris
Phvul.005G042400 2.0kb downstream 2.0kb downstream 3557 true Chr05: 4323860-4327416 Phaseolus vulgaris
Phvul.005G042400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 4325417-4327416 Phaseolus vulgaris
Phvul.005G042400 5.0kb upstream 5.0kb upstream 6557 true Chr05: 4318860-4325416 Phaseolus vulgaris
Phvul.005G042400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 4318860-4323859 Phaseolus vulgaris
Phvul.005G042400 5.0kb downstream 5.0kb downstream 6557 true Chr05: 4323860-4330416 Phaseolus vulgaris
Phvul.005G042400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 4325417-4330416 Phaseolus vulgaris
Phvul.005G042400 10.0kb upstream 10.0kb upstream 11557 true Chr05: 4313860-4325416 Phaseolus vulgaris
Phvul.005G042400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 4313860-4323859 Phaseolus vulgaris
Phvul.005G042400 10.0kb downstream 10.0kb downstream 11557 true Chr05: 4323860-4335416 Phaseolus vulgaris
Phvul.005G042400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 4325417-4335416 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308934 5265 Fabidae View MSA
124070081 5270 Rosid View MSA
123742701 5271 Pentapetalae View MSA
122796053 5272 Eudicot View MSA
122051618 5273 Angiosperm View MSA
121350294 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.95661 0.0 24.2933    
cufflinks 9.53129 0.0 25.7491    
cufflinks 18.3594 0.0 47.8402   High
cufflinks 21.2125 0.0 54.8388   High
cufflinks 10.8528 0.0 28.8713    
cufflinks 15.1191 0.0 39.6038    
cufflinks 4.4791 0.0 12.8364   Low
cufflinks 6.69137 0.0 18.6595    
cufflinks 8.40187 0.0 22.739    
cufflinks 11.8354 0.0 31.4358    
cufflinks 8.77502 0.0 23.6867    

0 Strain