Gene : Phvul.007G185500 P. vulgaris v2.1
Defline:  (1 of 3) PTHR31662:SF6 - DNA-BINDING STOREKEEPER PROTEIN-RELATED TRANSCRIPTIONAL REGULATOR Genomic Order:  1715
Name:  ? Phvul.007G185500 Secondary Identifier:  ? PAC:37167222
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G185500 0.5kb upstream 0.5kb upstream 1908 true Chr07: 30536567-30538474 Phaseolus vulgaris
Phvul.007G185500 0.5kb upstream 0.5kb upstream 500 false Chr07: 30536567-30537066 Phaseolus vulgaris
Phvul.007G185500 0.5kb downstream 0.5kb downstream 1908 true Chr07: 30537067-30538974 Phaseolus vulgaris
Phvul.007G185500 0.5kb downstream 0.5kb downstream 500 false Chr07: 30538475-30538974 Phaseolus vulgaris
Phvul.007G185500 1.0kb upstream 1.0kb upstream 2408 true Chr07: 30536067-30538474 Phaseolus vulgaris
Phvul.007G185500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 30536067-30537066 Phaseolus vulgaris
Phvul.007G185500 1.0kb downstream 1.0kb downstream 2408 true Chr07: 30537067-30539474 Phaseolus vulgaris
Phvul.007G185500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 30538475-30539474 Phaseolus vulgaris
Phvul.007G185500 2.0kb upstream 2.0kb upstream 3408 true Chr07: 30535067-30538474 Phaseolus vulgaris
Phvul.007G185500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 30535067-30537066 Phaseolus vulgaris
Phvul.007G185500 2.0kb downstream 2.0kb downstream 3408 true Chr07: 30537067-30540474 Phaseolus vulgaris
Phvul.007G185500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 30538475-30540474 Phaseolus vulgaris
Phvul.007G185500 5.0kb upstream 5.0kb upstream 6408 true Chr07: 30532067-30538474 Phaseolus vulgaris
Phvul.007G185500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 30532067-30537066 Phaseolus vulgaris
Phvul.007G185500 5.0kb downstream 5.0kb downstream 6408 true Chr07: 30537067-30543474 Phaseolus vulgaris
Phvul.007G185500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 30538475-30543474 Phaseolus vulgaris
Phvul.007G185500 10.0kb upstream 10.0kb upstream 11408 true Chr07: 30527067-30538474 Phaseolus vulgaris
Phvul.007G185500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 30527067-30537066 Phaseolus vulgaris
Phvul.007G185500 10.0kb downstream 10.0kb downstream 11408 true Chr07: 30537067-30548474 Phaseolus vulgaris
Phvul.007G185500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 30538475-30548474 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296905 5265 Fabidae View MSA
124042740 5270 Rosid View MSA
123751469 5271 Pentapetalae View MSA
122797914 5272 Eudicot View MSA
122051487 5273 Angiosperm View MSA
121348911 5274 Embryophyte View MSA
123381074 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.77645 0.0 5.76373   High
cufflinks 0.390131 0.0 1.47339 Low Low
cufflinks 0.565635 0.0 2.0744    
cufflinks 1.12303 0.0 3.83594    
cufflinks 1.67984 0.0 5.51073   High
cufflinks 0.504646 0.0 1.86315 Low Low
cufflinks 0.785315 0.0 2.7685    
cufflinks 0.707019 0.0 2.52984    
cufflinks 0.900132 0.0 3.12292    
cufflinks 0.74669 0.0 2.67242    
cufflinks 1.12691 0.0 3.85866    

0 Strain