Gene : Phvul.005G045400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24031:SF303 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL Genomic Order:  451
Name:  ? Phvul.005G045400 Secondary Identifier:  ? PAC:37152986
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G045400 0.5kb upstream 0.5kb upstream 2734 true Chr05: 4810390-4813123 Phaseolus vulgaris
Phvul.005G045400 0.5kb upstream 0.5kb upstream 500 false Chr05: 4810390-4810889 Phaseolus vulgaris
Phvul.005G045400 0.5kb downstream 0.5kb downstream 2734 true Chr05: 4810890-4813623 Phaseolus vulgaris
Phvul.005G045400 0.5kb downstream 0.5kb downstream 500 false Chr05: 4813124-4813623 Phaseolus vulgaris
Phvul.005G045400 1.0kb upstream 1.0kb upstream 3234 true Chr05: 4809890-4813123 Phaseolus vulgaris
Phvul.005G045400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 4809890-4810889 Phaseolus vulgaris
Phvul.005G045400 1.0kb downstream 1.0kb downstream 3234 true Chr05: 4810890-4814123 Phaseolus vulgaris
Phvul.005G045400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 4813124-4814123 Phaseolus vulgaris
Phvul.005G045400 2.0kb upstream 2.0kb upstream 4234 true Chr05: 4808890-4813123 Phaseolus vulgaris
Phvul.005G045400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 4808890-4810889 Phaseolus vulgaris
Phvul.005G045400 2.0kb downstream 2.0kb downstream 4234 true Chr05: 4810890-4815123 Phaseolus vulgaris
Phvul.005G045400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 4813124-4815123 Phaseolus vulgaris
Phvul.005G045400 5.0kb upstream 5.0kb upstream 7234 true Chr05: 4805890-4813123 Phaseolus vulgaris
Phvul.005G045400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 4805890-4810889 Phaseolus vulgaris
Phvul.005G045400 5.0kb downstream 5.0kb downstream 7234 true Chr05: 4810890-4818123 Phaseolus vulgaris
Phvul.005G045400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 4813124-4818123 Phaseolus vulgaris
Phvul.005G045400 10.0kb upstream 10.0kb upstream 12234 true Chr05: 4800890-4813123 Phaseolus vulgaris
Phvul.005G045400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 4800890-4810889 Phaseolus vulgaris
Phvul.005G045400 10.0kb downstream 10.0kb downstream 12234 true Chr05: 4810890-4823123 Phaseolus vulgaris
Phvul.005G045400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 4813124-4823123 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299913 5265 Fabidae View MSA
124066635 5270 Rosid View MSA
123739658 5271 Pentapetalae View MSA
122793354 5272 Eudicot View MSA
122045759 5273 Angiosperm View MSA
121346907 5274 Embryophyte View MSA
123426302 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.98476 0.0 21.265    
cufflinks 10.5009 0.0 27.5086    
cufflinks 24.7715 0.0 64.3749   High
cufflinks 6.64051 0.0 18.0745    
cufflinks 4.86239 0.0 13.5494    
cufflinks 11.7933 0.0 30.7235    
cufflinks 1.96107 0.0 5.98182   Low
cufflinks 2.58844 0.0 7.63011   Low
cufflinks 2.06154 0.0 6.2666   Low
cufflinks 8.11063 0.0 21.609    
cufflinks 4.11432 0.0 11.6249    

0 Strain