Gene : Phvul.005G045700 P. vulgaris v2.1
Defline:  (1 of 1) K09291 - nucleoprotein TPR (TPR, MLP1, MLP2) Genomic Order:  456
Name:  ? Phvul.005G045700 Secondary Identifier:  ? PAC:37153764
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G045700 0.5kb upstream 0.5kb upstream 31387 true Chr05: 4912759-4944145 Phaseolus vulgaris
Phvul.005G045700 0.5kb upstream 0.5kb upstream 500 false Chr05: 4943646-4944145 Phaseolus vulgaris
Phvul.005G045700 0.5kb downstream 0.5kb downstream 31387 true Chr05: 4912259-4943645 Phaseolus vulgaris
Phvul.005G045700 0.5kb downstream 0.5kb downstream 500 false Chr05: 4912259-4912758 Phaseolus vulgaris
Phvul.005G045700 1.0kb upstream 1.0kb upstream 31887 true Chr05: 4912759-4944645 Phaseolus vulgaris
Phvul.005G045700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 4943646-4944645 Phaseolus vulgaris
Phvul.005G045700 1.0kb downstream 1.0kb downstream 31887 true Chr05: 4911759-4943645 Phaseolus vulgaris
Phvul.005G045700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 4911759-4912758 Phaseolus vulgaris
Phvul.005G045700 2.0kb upstream 2.0kb upstream 32887 true Chr05: 4912759-4945645 Phaseolus vulgaris
Phvul.005G045700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 4943646-4945645 Phaseolus vulgaris
Phvul.005G045700 2.0kb downstream 2.0kb downstream 32887 true Chr05: 4910759-4943645 Phaseolus vulgaris
Phvul.005G045700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 4910759-4912758 Phaseolus vulgaris
Phvul.005G045700 5.0kb upstream 5.0kb upstream 35887 true Chr05: 4912759-4948645 Phaseolus vulgaris
Phvul.005G045700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 4943646-4948645 Phaseolus vulgaris
Phvul.005G045700 5.0kb downstream 5.0kb downstream 35887 true Chr05: 4907759-4943645 Phaseolus vulgaris
Phvul.005G045700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 4907759-4912758 Phaseolus vulgaris
Phvul.005G045700 10.0kb upstream 10.0kb upstream 40887 true Chr05: 4912759-4953645 Phaseolus vulgaris
Phvul.005G045700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 4943646-4953645 Phaseolus vulgaris
Phvul.005G045700 10.0kb downstream 10.0kb downstream 40887 true Chr05: 4902759-4943645 Phaseolus vulgaris
Phvul.005G045700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 4902759-4912758 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304759 5265 Fabidae View MSA
124062490 5270 Rosid View MSA
123739915 5271 Pentapetalae View MSA
122787990 5272 Eudicot View MSA
122044649 5273 Angiosperm View MSA
121346894 5274 Embryophyte View MSA
123425304 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.78858 0.0 9.29497   Low
cufflinks 10.2179 0.0 29.3332    
cufflinks 17.4128 0.0 56.4991    
cufflinks 3.43782 0.0 11.3046   Low
cufflinks 13.6219 0.0 46.8074    
cufflinks 16.5036 0.0 53.0807    
cufflinks 24.0316 0.0 83.311    
cufflinks 20.6284 0.0 68.8812    
cufflinks 22.7044 0.0 77.1579    
cufflinks 21.609 0.0 72.3487    
cufflinks 8.49809 0.0 24.1447    

0 Strain