Gene : Phvul.005G044000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23075:SF0 - ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 3 Genomic Order:  437
Name:  ? Phvul.005G044000 Secondary Identifier:  ? PAC:37154604
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G044000 0.5kb upstream 0.5kb upstream 5851 true Chr05: 4496828-4502678 Phaseolus vulgaris
Phvul.005G044000 0.5kb upstream 0.5kb upstream 500 false Chr05: 4496828-4497327 Phaseolus vulgaris
Phvul.005G044000 0.5kb downstream 0.5kb downstream 5851 true Chr05: 4497328-4503178 Phaseolus vulgaris
Phvul.005G044000 0.5kb downstream 0.5kb downstream 500 false Chr05: 4502679-4503178 Phaseolus vulgaris
Phvul.005G044000 1.0kb upstream 1.0kb upstream 6351 true Chr05: 4496328-4502678 Phaseolus vulgaris
Phvul.005G044000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 4496328-4497327 Phaseolus vulgaris
Phvul.005G044000 1.0kb downstream 1.0kb downstream 6351 true Chr05: 4497328-4503678 Phaseolus vulgaris
Phvul.005G044000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 4502679-4503678 Phaseolus vulgaris
Phvul.005G044000 2.0kb upstream 2.0kb upstream 7351 true Chr05: 4495328-4502678 Phaseolus vulgaris
Phvul.005G044000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 4495328-4497327 Phaseolus vulgaris
Phvul.005G044000 2.0kb downstream 2.0kb downstream 7351 true Chr05: 4497328-4504678 Phaseolus vulgaris
Phvul.005G044000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 4502679-4504678 Phaseolus vulgaris
Phvul.005G044000 5.0kb upstream 5.0kb upstream 10351 true Chr05: 4492328-4502678 Phaseolus vulgaris
Phvul.005G044000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 4492328-4497327 Phaseolus vulgaris
Phvul.005G044000 5.0kb downstream 5.0kb downstream 10351 true Chr05: 4497328-4507678 Phaseolus vulgaris
Phvul.005G044000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 4502679-4507678 Phaseolus vulgaris
Phvul.005G044000 10.0kb upstream 10.0kb upstream 15351 true Chr05: 4487328-4502678 Phaseolus vulgaris
Phvul.005G044000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 4487328-4497327 Phaseolus vulgaris
Phvul.005G044000 10.0kb downstream 10.0kb downstream 15351 true Chr05: 4497328-4512678 Phaseolus vulgaris
Phvul.005G044000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 4502679-4512678 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306849 5265 Fabidae View MSA
124062064 5270 Rosid View MSA
123743451 5271 Pentapetalae View MSA
122787141 5272 Eudicot View MSA
122051121 5273 Angiosperm View MSA
121347220 5274 Embryophyte View MSA
123424543 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.85443 0.0 10.8052   Low
cufflinks 8.46773 0.0 22.2956   High
cufflinks 4.91499 0.0 13.5121    
cufflinks 4.65275 0.0 12.9211    
cufflinks 6.01543 0.0 16.3463    
cufflinks 3.21304 0.0 9.16783   Low
cufflinks 7.05245 0.0 18.7495    
cufflinks 9.09921 0.0 23.799   High
cufflinks 8.76798 0.0 23.0004   High
cufflinks 5.07318 0.0 13.9238    
cufflinks 4.866 0.0 13.4234    

0 Strain