Gene : Phvul.007G188800 P. vulgaris v2.1
Defline:  (1 of 1) 4.1.1.21 - Phosphoribosylaminoimidazole carboxylase / AIR carboxylase Genomic Order:  1747
Name:  ? Phvul.007G188800 Secondary Identifier:  ? PAC:37164307
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6124 Phaseolus vulgaris pathologic  
Pvulgaris PWY-841 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G188800 0.5kb upstream 0.5kb upstream 10432 true Chr07: 30863586-30874017 Phaseolus vulgaris
Phvul.007G188800 0.5kb upstream 0.5kb upstream 500 false Chr07: 30863586-30864085 Phaseolus vulgaris
Phvul.007G188800 0.5kb downstream 0.5kb downstream 10432 true Chr07: 30864086-30874517 Phaseolus vulgaris
Phvul.007G188800 0.5kb downstream 0.5kb downstream 500 false Chr07: 30874018-30874517 Phaseolus vulgaris
Phvul.007G188800 1.0kb upstream 1.0kb upstream 10932 true Chr07: 30863086-30874017 Phaseolus vulgaris
Phvul.007G188800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 30863086-30864085 Phaseolus vulgaris
Phvul.007G188800 1.0kb downstream 1.0kb downstream 10932 true Chr07: 30864086-30875017 Phaseolus vulgaris
Phvul.007G188800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 30874018-30875017 Phaseolus vulgaris
Phvul.007G188800 2.0kb upstream 2.0kb upstream 11932 true Chr07: 30862086-30874017 Phaseolus vulgaris
Phvul.007G188800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 30862086-30864085 Phaseolus vulgaris
Phvul.007G188800 2.0kb downstream 2.0kb downstream 11932 true Chr07: 30864086-30876017 Phaseolus vulgaris
Phvul.007G188800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 30874018-30876017 Phaseolus vulgaris
Phvul.007G188800 5.0kb upstream 5.0kb upstream 14932 true Chr07: 30859086-30874017 Phaseolus vulgaris
Phvul.007G188800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 30859086-30864085 Phaseolus vulgaris
Phvul.007G188800 5.0kb downstream 5.0kb downstream 14932 true Chr07: 30864086-30879017 Phaseolus vulgaris
Phvul.007G188800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 30874018-30879017 Phaseolus vulgaris
Phvul.007G188800 10.0kb upstream 10.0kb upstream 19932 true Chr07: 30854086-30874017 Phaseolus vulgaris
Phvul.007G188800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 30854086-30864085 Phaseolus vulgaris
Phvul.007G188800 10.0kb downstream 10.0kb downstream 19932 true Chr07: 30864086-30884017 Phaseolus vulgaris
Phvul.007G188800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 30874018-30884017 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308610 5265 Fabidae View MSA
124064893 5270 Rosid View MSA
123748384 5271 Pentapetalae View MSA
122790389 5272 Eudicot View MSA
122043847 5273 Angiosperm View MSA
121345366 5274 Embryophyte View MSA
123425127 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.1783 0.0 14.1784    
cufflinks 6.35038 0.0 17.0847    
cufflinks 9.46587 0.0 24.768    
cufflinks 6.46037 0.0 17.4705    
cufflinks 6.03693 0.0 16.4    
cufflinks 5.43152 0.0 14.7907    
cufflinks 14.5474 0.0 37.6198    
cufflinks 54.1891 0.0 150.306 High High
cufflinks 11.325 0.0 29.4579    
cufflinks 10.7793 0.0 28.0846    
cufflinks 5.82241 0.0 15.8405    

0 Strain