Gene : Phvul.005G046600 P. vulgaris v2.1
Defline:  (1 of 9) PTHR24177:SF52 - ANKYRIN REPEAT FAMILY PROTEIN-RELATED Genomic Order:  467
Name:  ? Phvul.005G046600 Secondary Identifier:  ? PAC:37153450
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G046600 0.5kb upstream 0.5kb upstream 7290 true Chr05: 5173632-5180921 Phaseolus vulgaris
Phvul.005G046600 0.5kb upstream 0.5kb upstream 500 false Chr05: 5173632-5174131 Phaseolus vulgaris
Phvul.005G046600 0.5kb downstream 0.5kb downstream 7290 true Chr05: 5174132-5181421 Phaseolus vulgaris
Phvul.005G046600 0.5kb downstream 0.5kb downstream 500 false Chr05: 5180922-5181421 Phaseolus vulgaris
Phvul.005G046600 1.0kb upstream 1.0kb upstream 7790 true Chr05: 5173132-5180921 Phaseolus vulgaris
Phvul.005G046600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 5173132-5174131 Phaseolus vulgaris
Phvul.005G046600 1.0kb downstream 1.0kb downstream 7790 true Chr05: 5174132-5181921 Phaseolus vulgaris
Phvul.005G046600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 5180922-5181921 Phaseolus vulgaris
Phvul.005G046600 2.0kb upstream 2.0kb upstream 8790 true Chr05: 5172132-5180921 Phaseolus vulgaris
Phvul.005G046600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 5172132-5174131 Phaseolus vulgaris
Phvul.005G046600 2.0kb downstream 2.0kb downstream 8790 true Chr05: 5174132-5182921 Phaseolus vulgaris
Phvul.005G046600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 5180922-5182921 Phaseolus vulgaris
Phvul.005G046600 5.0kb upstream 5.0kb upstream 11790 true Chr05: 5169132-5180921 Phaseolus vulgaris
Phvul.005G046600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 5169132-5174131 Phaseolus vulgaris
Phvul.005G046600 5.0kb downstream 5.0kb downstream 11790 true Chr05: 5174132-5185921 Phaseolus vulgaris
Phvul.005G046600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 5180922-5185921 Phaseolus vulgaris
Phvul.005G046600 10.0kb upstream 10.0kb upstream 16790 true Chr05: 5164132-5180921 Phaseolus vulgaris
Phvul.005G046600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 5164132-5174131 Phaseolus vulgaris
Phvul.005G046600 10.0kb downstream 10.0kb downstream 16790 true Chr05: 5174132-5190921 Phaseolus vulgaris
Phvul.005G046600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 5180922-5190921 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315057 5265 Fabidae View MSA
124074725 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.56472E-4 0.0 0.00709498 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 8.50799E-5 0.0 0.00285704 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 9.57091E-5 0.0 0.00311647 Low  

0 Strain