Gene : Phvul.005G046900 P. vulgaris v2.1
Defline:  (1 of 5) KOG0508//KOG4412 - Ankyrin repeat protein // 26S proteasome regulatory complex, subunit PSMD10 Genomic Order:  470
Name:  ? Phvul.005G046900 Secondary Identifier:  ? PAC:37153556
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G046900 0.5kb upstream 0.5kb upstream 4984 true Chr05: 5267587-5272570 Phaseolus vulgaris
Phvul.005G046900 0.5kb upstream 0.5kb upstream 500 false Chr05: 5267587-5268086 Phaseolus vulgaris
Phvul.005G046900 0.5kb downstream 0.5kb downstream 4984 true Chr05: 5268087-5273070 Phaseolus vulgaris
Phvul.005G046900 0.5kb downstream 0.5kb downstream 500 false Chr05: 5272571-5273070 Phaseolus vulgaris
Phvul.005G046900 1.0kb upstream 1.0kb upstream 5484 true Chr05: 5267087-5272570 Phaseolus vulgaris
Phvul.005G046900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 5267087-5268086 Phaseolus vulgaris
Phvul.005G046900 1.0kb downstream 1.0kb downstream 5484 true Chr05: 5268087-5273570 Phaseolus vulgaris
Phvul.005G046900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 5272571-5273570 Phaseolus vulgaris
Phvul.005G046900 2.0kb upstream 2.0kb upstream 6484 true Chr05: 5266087-5272570 Phaseolus vulgaris
Phvul.005G046900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 5266087-5268086 Phaseolus vulgaris
Phvul.005G046900 2.0kb downstream 2.0kb downstream 6484 true Chr05: 5268087-5274570 Phaseolus vulgaris
Phvul.005G046900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 5272571-5274570 Phaseolus vulgaris
Phvul.005G046900 5.0kb upstream 5.0kb upstream 9484 true Chr05: 5263087-5272570 Phaseolus vulgaris
Phvul.005G046900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 5263087-5268086 Phaseolus vulgaris
Phvul.005G046900 5.0kb downstream 5.0kb downstream 9484 true Chr05: 5268087-5277570 Phaseolus vulgaris
Phvul.005G046900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 5272571-5277570 Phaseolus vulgaris
Phvul.005G046900 10.0kb upstream 10.0kb upstream 14484 true Chr05: 5258087-5272570 Phaseolus vulgaris
Phvul.005G046900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 5258087-5268086 Phaseolus vulgaris
Phvul.005G046900 10.0kb downstream 10.0kb downstream 14484 true Chr05: 5268087-5282570 Phaseolus vulgaris
Phvul.005G046900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 5272571-5282570 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315057 5265 Fabidae View MSA
124074725 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0376365 0.0 0.173237 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.042608 0.0 0.193994 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.023225 0.0 0.112807 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain