Gene : Phvul.005G046000 P. vulgaris v2.1
Defline:  (1 of 96) 1.11.1.7 - Peroxidase / Lactoperoxidase Genomic Order:  459
Name:  ? Phvul.005G046000 Secondary Identifier:  ? PAC:37154383
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5466 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6824 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7214 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7445 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G046000 0.5kb upstream 0.5kb upstream 2781 true Chr05: 5029451-5032231 Phaseolus vulgaris
Phvul.005G046000 0.5kb upstream 0.5kb upstream 500 false Chr05: 5029451-5029950 Phaseolus vulgaris
Phvul.005G046000 0.5kb downstream 0.5kb downstream 2781 true Chr05: 5029951-5032731 Phaseolus vulgaris
Phvul.005G046000 0.5kb downstream 0.5kb downstream 500 false Chr05: 5032232-5032731 Phaseolus vulgaris
Phvul.005G046000 1.0kb upstream 1.0kb upstream 3281 true Chr05: 5028951-5032231 Phaseolus vulgaris
Phvul.005G046000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 5028951-5029950 Phaseolus vulgaris
Phvul.005G046000 1.0kb downstream 1.0kb downstream 3281 true Chr05: 5029951-5033231 Phaseolus vulgaris
Phvul.005G046000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 5032232-5033231 Phaseolus vulgaris
Phvul.005G046000 2.0kb upstream 2.0kb upstream 4281 true Chr05: 5027951-5032231 Phaseolus vulgaris
Phvul.005G046000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 5027951-5029950 Phaseolus vulgaris
Phvul.005G046000 2.0kb downstream 2.0kb downstream 4281 true Chr05: 5029951-5034231 Phaseolus vulgaris
Phvul.005G046000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 5032232-5034231 Phaseolus vulgaris
Phvul.005G046000 5.0kb upstream 5.0kb upstream 7281 true Chr05: 5024951-5032231 Phaseolus vulgaris
Phvul.005G046000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 5024951-5029950 Phaseolus vulgaris
Phvul.005G046000 5.0kb downstream 5.0kb downstream 7281 true Chr05: 5029951-5037231 Phaseolus vulgaris
Phvul.005G046000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 5032232-5037231 Phaseolus vulgaris
Phvul.005G046000 10.0kb upstream 10.0kb upstream 12281 true Chr05: 5019951-5032231 Phaseolus vulgaris
Phvul.005G046000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 5019951-5029950 Phaseolus vulgaris
Phvul.005G046000 10.0kb downstream 10.0kb downstream 12281 true Chr05: 5029951-5042231 Phaseolus vulgaris
Phvul.005G046000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 5032232-5042231 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303716 5265 Fabidae View MSA
124071148 5270 Rosid View MSA
123748177 5271 Pentapetalae View MSA
122794454 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.065171 0.0 0.299975 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.365153 0.0 1.44175 Low  
cufflinks 0.108121 0.0 0.473427 Low  
cufflinks 9.54147 0.0 27.2046   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain