Gene : Phvul.005G048700 P. vulgaris v2.1
Defline:  (1 of 1) 1.1.1.205 - IMP dehydrogenase / Inosinic acid dehydrogenase Genomic Order:  484
Name:  ? Phvul.005G048700 Secondary Identifier:  ? PAC:37152504
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5695 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6596 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7221 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7228 Phaseolus vulgaris pathologic  
Pvulgaris PWY-841 Phaseolus vulgaris pathologic  
Pvulgaris URSIN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G048700 0.5kb upstream 0.5kb upstream 4431 true Chr05: 5652063-5656493 Phaseolus vulgaris
Phvul.005G048700 0.5kb upstream 0.5kb upstream 500 false Chr05: 5655994-5656493 Phaseolus vulgaris
Phvul.005G048700 0.5kb downstream 0.5kb downstream 4431 true Chr05: 5651563-5655993 Phaseolus vulgaris
Phvul.005G048700 0.5kb downstream 0.5kb downstream 500 false Chr05: 5651563-5652062 Phaseolus vulgaris
Phvul.005G048700 1.0kb upstream 1.0kb upstream 4931 true Chr05: 5652063-5656993 Phaseolus vulgaris
Phvul.005G048700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 5655994-5656993 Phaseolus vulgaris
Phvul.005G048700 1.0kb downstream 1.0kb downstream 4931 true Chr05: 5651063-5655993 Phaseolus vulgaris
Phvul.005G048700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 5651063-5652062 Phaseolus vulgaris
Phvul.005G048700 2.0kb upstream 2.0kb upstream 5931 true Chr05: 5652063-5657993 Phaseolus vulgaris
Phvul.005G048700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 5655994-5657993 Phaseolus vulgaris
Phvul.005G048700 2.0kb downstream 2.0kb downstream 5931 true Chr05: 5650063-5655993 Phaseolus vulgaris
Phvul.005G048700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 5650063-5652062 Phaseolus vulgaris
Phvul.005G048700 5.0kb upstream 5.0kb upstream 8931 true Chr05: 5652063-5660993 Phaseolus vulgaris
Phvul.005G048700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 5655994-5660993 Phaseolus vulgaris
Phvul.005G048700 5.0kb downstream 5.0kb downstream 8931 true Chr05: 5647063-5655993 Phaseolus vulgaris
Phvul.005G048700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 5647063-5652062 Phaseolus vulgaris
Phvul.005G048700 10.0kb upstream 10.0kb upstream 13931 true Chr05: 5652063-5665993 Phaseolus vulgaris
Phvul.005G048700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 5655994-5665993 Phaseolus vulgaris
Phvul.005G048700 10.0kb downstream 10.0kb downstream 13931 true Chr05: 5642063-5655993 Phaseolus vulgaris
Phvul.005G048700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 5642063-5652062 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312414 5265 Fabidae View MSA
124063330 5270 Rosid View MSA
123738043 5271 Pentapetalae View MSA
122797755 5272 Eudicot View MSA
122042253 5273 Angiosperm View MSA
121346920 5274 Embryophyte View MSA
123424189 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 58.0614 0.0 162.355 High  
cufflinks 82.8851 0.0 240.664 High  
cufflinks 12.3056 0.0 31.9483   Low
cufflinks 79.0144 0.0 227.233 High  
cufflinks 78.2291 0.0 227.23 High  
cufflinks 18.9391 0.0 49.0024   Low
cufflinks 51.3357 0.0 142.068 High  
cufflinks 216.18 0.0 742.928 High High
cufflinks 140.168 0.0 443.104 High  
cufflinks 116.921 0.0 357.632 High  
cufflinks 53.6554 0.0 149.026 High  

0 Strain