Gene : Phvul.005G048900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11040//PTHR11040:SF59 - ZINC/IRON TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  486
Name:  ? Phvul.005G048900 Secondary Identifier:  ? PAC:37153892
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G048900 0.5kb upstream 0.5kb upstream 2658 true Chr05: 5682746-5685403 Phaseolus vulgaris
Phvul.005G048900 0.5kb upstream 0.5kb upstream 500 false Chr05: 5684904-5685403 Phaseolus vulgaris
Phvul.005G048900 0.5kb downstream 0.5kb downstream 2658 true Chr05: 5682246-5684903 Phaseolus vulgaris
Phvul.005G048900 0.5kb downstream 0.5kb downstream 500 false Chr05: 5682246-5682745 Phaseolus vulgaris
Phvul.005G048900 1.0kb upstream 1.0kb upstream 3158 true Chr05: 5682746-5685903 Phaseolus vulgaris
Phvul.005G048900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 5684904-5685903 Phaseolus vulgaris
Phvul.005G048900 1.0kb downstream 1.0kb downstream 3158 true Chr05: 5681746-5684903 Phaseolus vulgaris
Phvul.005G048900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 5681746-5682745 Phaseolus vulgaris
Phvul.005G048900 2.0kb upstream 2.0kb upstream 4158 true Chr05: 5682746-5686903 Phaseolus vulgaris
Phvul.005G048900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 5684904-5686903 Phaseolus vulgaris
Phvul.005G048900 2.0kb downstream 2.0kb downstream 4158 true Chr05: 5680746-5684903 Phaseolus vulgaris
Phvul.005G048900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 5680746-5682745 Phaseolus vulgaris
Phvul.005G048900 5.0kb upstream 5.0kb upstream 7158 true Chr05: 5682746-5689903 Phaseolus vulgaris
Phvul.005G048900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 5684904-5689903 Phaseolus vulgaris
Phvul.005G048900 5.0kb downstream 5.0kb downstream 7158 true Chr05: 5677746-5684903 Phaseolus vulgaris
Phvul.005G048900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 5677746-5682745 Phaseolus vulgaris
Phvul.005G048900 10.0kb upstream 10.0kb upstream 12158 true Chr05: 5682746-5694903 Phaseolus vulgaris
Phvul.005G048900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 5684904-5694903 Phaseolus vulgaris
Phvul.005G048900 10.0kb downstream 10.0kb downstream 12158 true Chr05: 5672746-5684903 Phaseolus vulgaris
Phvul.005G048900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 5672746-5682745 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311050 5265 Fabidae View MSA
124066184 5270 Rosid View MSA
123744971 5271 Pentapetalae View MSA
122785853 5272 Eudicot View MSA
122041965 5273 Angiosperm View MSA
121350029 5274 Embryophyte View MSA
123428132 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.6899 0.0 46.7407    
cufflinks 3.7178 0.0 11.4365    
cufflinks 0.794785 0.0 2.88436    
cufflinks 7.6768 0.0 21.8263    
cufflinks 9.96559 0.0 27.7009    
cufflinks 0.0670805 0.0 0.301056 Low Low
cufflinks 3.74755 0.0 11.5299    
cufflinks 0.973547 0.0 3.46869    
cufflinks 1.77276 0.0 5.95176    
cufflinks 42.3625 0.0 109.616 High High
cufflinks 15.6705 0.0 41.9664    

0 Strain