Gene : Phvul.005G047500 P. vulgaris v2.1
Defline:  (1 of 10) PF04788 - Protein of unknown function (DUF620) (DUF620) Genomic Order:  475
Name:  ? Phvul.005G047500 Secondary Identifier:  ? PAC:37153959
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G047500 0.5kb upstream 0.5kb upstream 3708 true Chr05: 5452984-5456691 Phaseolus vulgaris
Phvul.005G047500 0.5kb upstream 0.5kb upstream 500 false Chr05: 5452984-5453483 Phaseolus vulgaris
Phvul.005G047500 0.5kb downstream 0.5kb downstream 3708 true Chr05: 5453484-5457191 Phaseolus vulgaris
Phvul.005G047500 0.5kb downstream 0.5kb downstream 500 false Chr05: 5456692-5457191 Phaseolus vulgaris
Phvul.005G047500 1.0kb upstream 1.0kb upstream 4208 true Chr05: 5452484-5456691 Phaseolus vulgaris
Phvul.005G047500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 5452484-5453483 Phaseolus vulgaris
Phvul.005G047500 1.0kb downstream 1.0kb downstream 4208 true Chr05: 5453484-5457691 Phaseolus vulgaris
Phvul.005G047500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 5456692-5457691 Phaseolus vulgaris
Phvul.005G047500 2.0kb upstream 2.0kb upstream 5208 true Chr05: 5451484-5456691 Phaseolus vulgaris
Phvul.005G047500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 5451484-5453483 Phaseolus vulgaris
Phvul.005G047500 2.0kb downstream 2.0kb downstream 5208 true Chr05: 5453484-5458691 Phaseolus vulgaris
Phvul.005G047500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 5456692-5458691 Phaseolus vulgaris
Phvul.005G047500 5.0kb upstream 5.0kb upstream 8208 true Chr05: 5448484-5456691 Phaseolus vulgaris
Phvul.005G047500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 5448484-5453483 Phaseolus vulgaris
Phvul.005G047500 5.0kb downstream 5.0kb downstream 8208 true Chr05: 5453484-5461691 Phaseolus vulgaris
Phvul.005G047500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 5456692-5461691 Phaseolus vulgaris
Phvul.005G047500 10.0kb upstream 10.0kb upstream 13208 true Chr05: 5443484-5456691 Phaseolus vulgaris
Phvul.005G047500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 5443484-5453483 Phaseolus vulgaris
Phvul.005G047500 10.0kb downstream 10.0kb downstream 13208 true Chr05: 5453484-5466691 Phaseolus vulgaris
Phvul.005G047500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 5456692-5466691 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301751 5265 Fabidae View MSA
124065577 5270 Rosid View MSA
123739517 5271 Pentapetalae View MSA
122769955 5272 Eudicot View MSA
122044240 5273 Angiosperm View MSA
121310259 5274 Embryophyte View MSA
123347798 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.30079 0.0 7.32742   Low
cufflinks 7.56249 0.0 21.1188    
cufflinks 6.02101 0.0 17.2209    
cufflinks 3.00809 0.0 9.26732    
cufflinks 40.2317 0.0 104.427 High High
cufflinks 11.8166 0.0 31.7562    
cufflinks 19.8989 0.0 51.6903    
cufflinks 4.73073 0.0 13.8154    
cufflinks 9.74988 0.0 26.4624    
cufflinks 1.87222 0.0 6.10189   Low
cufflinks 52.1639 0.0 136.861 High High

0 Strain