Gene : Phvul.005G173750 P. vulgaris v2.1
Defline:  (1 of 18) PTHR19241:SF219 - ABC TRANSPORTER G FAMILY MEMBER 38 Genomic Order:  1631
Name:  ? Phvul.005G173750 Secondary Identifier:  ? PAC:37152478
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G173750 0.5kb upstream 0.5kb upstream 7345 true Chr05: 39951217-39958561 Phaseolus vulgaris
Phvul.005G173750 0.5kb upstream 0.5kb upstream 500 false Chr05: 39958062-39958561 Phaseolus vulgaris
Phvul.005G173750 0.5kb downstream 0.5kb downstream 7345 true Chr05: 39950717-39958061 Phaseolus vulgaris
Phvul.005G173750 0.5kb downstream 0.5kb downstream 500 false Chr05: 39950717-39951216 Phaseolus vulgaris
Phvul.005G173750 1.0kb upstream 1.0kb upstream 7845 true Chr05: 39951217-39959061 Phaseolus vulgaris
Phvul.005G173750 1.0kb upstream 1.0kb upstream 1000 false Chr05: 39958062-39959061 Phaseolus vulgaris
Phvul.005G173750 1.0kb downstream 1.0kb downstream 7845 true Chr05: 39950217-39958061 Phaseolus vulgaris
Phvul.005G173750 1.0kb downstream 1.0kb downstream 1000 false Chr05: 39950217-39951216 Phaseolus vulgaris
Phvul.005G173750 2.0kb upstream 2.0kb upstream 8845 true Chr05: 39951217-39960061 Phaseolus vulgaris
Phvul.005G173750 2.0kb upstream 2.0kb upstream 2000 false Chr05: 39958062-39960061 Phaseolus vulgaris
Phvul.005G173750 2.0kb downstream 2.0kb downstream 8845 true Chr05: 39949217-39958061 Phaseolus vulgaris
Phvul.005G173750 2.0kb downstream 2.0kb downstream 2000 false Chr05: 39949217-39951216 Phaseolus vulgaris
Phvul.005G173750 5.0kb upstream 5.0kb upstream 11845 true Chr05: 39951217-39963061 Phaseolus vulgaris
Phvul.005G173750 5.0kb upstream 5.0kb upstream 5000 false Chr05: 39958062-39963061 Phaseolus vulgaris
Phvul.005G173750 5.0kb downstream 5.0kb downstream 11845 true Chr05: 39946217-39958061 Phaseolus vulgaris
Phvul.005G173750 5.0kb downstream 5.0kb downstream 5000 false Chr05: 39946217-39951216 Phaseolus vulgaris
Phvul.005G173750 10.0kb upstream 10.0kb upstream 16845 true Chr05: 39951217-39968061 Phaseolus vulgaris
Phvul.005G173750 10.0kb upstream 10.0kb upstream 10000 false Chr05: 39958062-39968061 Phaseolus vulgaris
Phvul.005G173750 10.0kb downstream 10.0kb downstream 16845 true Chr05: 39941217-39958061 Phaseolus vulgaris
Phvul.005G173750 10.0kb downstream 10.0kb downstream 10000 false Chr05: 39941217-39951216 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041102 5273 Angiosperm View MSA
122314149 5265 Fabidae View MSA
124071105 5270 Rosid View MSA
123750377 5271 Pentapetalae View MSA
122791743 5272 Eudicot View MSA
123428903 5275 Viridiplantae View MSA
121351020 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.8855 0.0 28.2174    
cufflinks 1.75319 0.0 4.9864   Low
cufflinks 2.70745 0.0 7.39077    
cufflinks 0.807207 0.0 2.5219   Low
cufflinks 45.9565 0.0 133.752 High  
cufflinks 1.01991 0.0 3.0776   Low
cufflinks 68.5419 0.0 213.389 High High
cufflinks 43.3126 0.0 126.157 High  
cufflinks 57.6454 0.0 174.069 High High
cufflinks 10.8905 0.0 28.2277    
cufflinks 18.3172 0.0 48.5876    

0 Strain