Gene : Phvul.005G174900 P. vulgaris v2.1
Defline:  (1 of 1) K11864 - BRCA1/BRCA2-containing complex subunit 3 (BRCC3) Genomic Order:  1643
Name:  ? Phvul.005G174900 Secondary Identifier:  ? PAC:37153496
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G174900 0.5kb upstream 0.5kb upstream 5047 true Chr05: 40063372-40068418 Phaseolus vulgaris
Phvul.005G174900 0.5kb upstream 0.5kb upstream 500 false Chr05: 40063372-40063871 Phaseolus vulgaris
Phvul.005G174900 0.5kb downstream 0.5kb downstream 5047 true Chr05: 40063872-40068918 Phaseolus vulgaris
Phvul.005G174900 0.5kb downstream 0.5kb downstream 500 false Chr05: 40068419-40068918 Phaseolus vulgaris
Phvul.005G174900 1.0kb upstream 1.0kb upstream 5547 true Chr05: 40062872-40068418 Phaseolus vulgaris
Phvul.005G174900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40062872-40063871 Phaseolus vulgaris
Phvul.005G174900 1.0kb downstream 1.0kb downstream 5547 true Chr05: 40063872-40069418 Phaseolus vulgaris
Phvul.005G174900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40068419-40069418 Phaseolus vulgaris
Phvul.005G174900 2.0kb upstream 2.0kb upstream 6547 true Chr05: 40061872-40068418 Phaseolus vulgaris
Phvul.005G174900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40061872-40063871 Phaseolus vulgaris
Phvul.005G174900 2.0kb downstream 2.0kb downstream 6547 true Chr05: 40063872-40070418 Phaseolus vulgaris
Phvul.005G174900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40068419-40070418 Phaseolus vulgaris
Phvul.005G174900 5.0kb upstream 5.0kb upstream 9547 true Chr05: 40058872-40068418 Phaseolus vulgaris
Phvul.005G174900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40058872-40063871 Phaseolus vulgaris
Phvul.005G174900 5.0kb downstream 5.0kb downstream 9547 true Chr05: 40063872-40073418 Phaseolus vulgaris
Phvul.005G174900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40068419-40073418 Phaseolus vulgaris
Phvul.005G174900 10.0kb upstream 10.0kb upstream 14547 true Chr05: 40053872-40068418 Phaseolus vulgaris
Phvul.005G174900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40053872-40063871 Phaseolus vulgaris
Phvul.005G174900 10.0kb downstream 10.0kb downstream 14547 true Chr05: 40063872-40078418 Phaseolus vulgaris
Phvul.005G174900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40068419-40078418 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306931 5265 Fabidae View MSA
124064840 5270 Rosid View MSA
123741552 5271 Pentapetalae View MSA
122788768 5272 Eudicot View MSA
122043403 5273 Angiosperm View MSA
121344026 5274 Embryophyte View MSA
123428720 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.64639 0.0 18.8302   Low
cufflinks 8.88429 0.0 27.1863    
cufflinks 7.12735 0.0 22.4341    
cufflinks 7.67331 0.0 23.9772    
cufflinks 5.65743 0.0 18.7994   Low
cufflinks 7.10084 0.0 22.401    
cufflinks 7.07936 0.0 22.4207    
cufflinks 10.7312 0.0 32.03   High
cufflinks 5.34165 0.0 17.8265   Low
cufflinks 7.86702 0.0 32.6657    
cufflinks 8.04218 0.0 33.5063    

0 Strain