Gene : Phvul.005G174100 P. vulgaris v2.1
Defline:  (1 of 2) 3.1.3.76 - Lipid-phosphate phosphatase / Soluble epoxide hydrolase Genomic Order:  1635
Name:  ? Phvul.005G174100 Secondary Identifier:  ? PAC:37153552
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G174100 0.5kb upstream 0.5kb upstream 5629 true Chr05: 39988503-39994131 Phaseolus vulgaris
Phvul.005G174100 0.5kb upstream 0.5kb upstream 500 false Chr05: 39988503-39989002 Phaseolus vulgaris
Phvul.005G174100 0.5kb downstream 0.5kb downstream 5629 true Chr05: 39989003-39994631 Phaseolus vulgaris
Phvul.005G174100 0.5kb downstream 0.5kb downstream 500 false Chr05: 39994132-39994631 Phaseolus vulgaris
Phvul.005G174100 1.0kb upstream 1.0kb upstream 6129 true Chr05: 39988003-39994131 Phaseolus vulgaris
Phvul.005G174100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 39988003-39989002 Phaseolus vulgaris
Phvul.005G174100 1.0kb downstream 1.0kb downstream 6129 true Chr05: 39989003-39995131 Phaseolus vulgaris
Phvul.005G174100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 39994132-39995131 Phaseolus vulgaris
Phvul.005G174100 2.0kb upstream 2.0kb upstream 7129 true Chr05: 39987003-39994131 Phaseolus vulgaris
Phvul.005G174100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 39987003-39989002 Phaseolus vulgaris
Phvul.005G174100 2.0kb downstream 2.0kb downstream 7129 true Chr05: 39989003-39996131 Phaseolus vulgaris
Phvul.005G174100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 39994132-39996131 Phaseolus vulgaris
Phvul.005G174100 5.0kb upstream 5.0kb upstream 10129 true Chr05: 39984003-39994131 Phaseolus vulgaris
Phvul.005G174100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 39984003-39989002 Phaseolus vulgaris
Phvul.005G174100 5.0kb downstream 5.0kb downstream 10129 true Chr05: 39989003-39999131 Phaseolus vulgaris
Phvul.005G174100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 39994132-39999131 Phaseolus vulgaris
Phvul.005G174100 10.0kb upstream 10.0kb upstream 15129 true Chr05: 39979003-39994131 Phaseolus vulgaris
Phvul.005G174100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 39979003-39989002 Phaseolus vulgaris
Phvul.005G174100 10.0kb downstream 10.0kb downstream 15129 true Chr05: 39989003-40004131 Phaseolus vulgaris
Phvul.005G174100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 39994132-40004131 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309229 5265 Fabidae View MSA
124065510 5270 Rosid View MSA
123753600 5271 Pentapetalae View MSA
122789724 5272 Eudicot View MSA
122045199 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121343939 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.25708 0.0 22.0356    
cufflinks 18.8831 0.0 48.8118   High
cufflinks 7.40989 0.0 19.9729   Low
cufflinks 26.6921 0.0 69.2787   High
cufflinks 12.6992 0.0 33.0939    
cufflinks 12.4763 0.0 32.5512    
cufflinks 10.2769 0.0 27.0487    
cufflinks 16.4455 0.0 42.5494    
cufflinks 12.4736 0.0 32.5659    
cufflinks 6.68782 0.0 18.1576   Low
cufflinks 10.4806 0.0 27.5716    

0 Strain