Gene : Phvul.010G032300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11771//PTHR11771:SF59 - LIPOXYGENASE // SUBFAMILY NOT NAMED Genomic Order:  321
Name:  ? Phvul.010G032300 Secondary Identifier:  ? PAC:37143847
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5409 Phaseolus vulgaris pathologic  
Pvulgaris PWY-735 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G032300 0.5kb upstream 0.5kb upstream 7592 true Chr10: 4688836-4696427 Phaseolus vulgaris
Phvul.010G032300 0.5kb upstream 0.5kb upstream 500 false Chr10: 4688836-4689335 Phaseolus vulgaris
Phvul.010G032300 0.5kb downstream 0.5kb downstream 7592 true Chr10: 4689336-4696927 Phaseolus vulgaris
Phvul.010G032300 0.5kb downstream 0.5kb downstream 500 false Chr10: 4696428-4696927 Phaseolus vulgaris
Phvul.010G032300 1.0kb upstream 1.0kb upstream 8092 true Chr10: 4688336-4696427 Phaseolus vulgaris
Phvul.010G032300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 4688336-4689335 Phaseolus vulgaris
Phvul.010G032300 1.0kb downstream 1.0kb downstream 8092 true Chr10: 4689336-4697427 Phaseolus vulgaris
Phvul.010G032300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 4696428-4697427 Phaseolus vulgaris
Phvul.010G032300 2.0kb upstream 2.0kb upstream 9092 true Chr10: 4687336-4696427 Phaseolus vulgaris
Phvul.010G032300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 4687336-4689335 Phaseolus vulgaris
Phvul.010G032300 2.0kb downstream 2.0kb downstream 9092 true Chr10: 4689336-4698427 Phaseolus vulgaris
Phvul.010G032300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 4696428-4698427 Phaseolus vulgaris
Phvul.010G032300 5.0kb upstream 5.0kb upstream 12092 true Chr10: 4684336-4696427 Phaseolus vulgaris
Phvul.010G032300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 4684336-4689335 Phaseolus vulgaris
Phvul.010G032300 5.0kb downstream 5.0kb downstream 12092 true Chr10: 4689336-4701427 Phaseolus vulgaris
Phvul.010G032300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 4696428-4701427 Phaseolus vulgaris
Phvul.010G032300 10.0kb upstream 10.0kb upstream 17092 true Chr10: 4679336-4696427 Phaseolus vulgaris
Phvul.010G032300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 4679336-4689335 Phaseolus vulgaris
Phvul.010G032300 10.0kb downstream 10.0kb downstream 17092 true Chr10: 4689336-4706427 Phaseolus vulgaris
Phvul.010G032300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 4696428-4706427 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303150 5265 Fabidae View MSA
124071390 5270 Rosid View MSA
123750052 5271 Pentapetalae View MSA
122773445 5272 Eudicot View MSA
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.131015 0.0 0.523667 Low Low
cufflinks 0.505305 0.0 2.84726    
cufflinks 1.38085 0.0 5.90365    
cufflinks 0.380413 0.0 1.73726 Low  
cufflinks 0.917788 0.0 3.51177    
cufflinks 0.686626 0.0 3.69728    
cufflinks 1.59932 0.0 5.22496    
cufflinks 0.519917 0.0 2.15249    
cufflinks 2.21045 0.0 8.72443   High
cufflinks 0.248619 0.0 1.16907 Low Low
cufflinks 1.37104 0.0 4.68871    

0 Strain