Gene : Phvul.010G033400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31956:SF1 - NON-SPECIFIC PHOSPHOLIPASE C3-RELATED Genomic Order:  331
Name:  ? Phvul.010G033400 Secondary Identifier:  ? PAC:37142322
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris LIPASYN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G033400 0.5kb upstream 0.5kb upstream 3375 true Chr10: 4876034-4879408 Phaseolus vulgaris
Phvul.010G033400 0.5kb upstream 0.5kb upstream 500 false Chr10: 4878909-4879408 Phaseolus vulgaris
Phvul.010G033400 0.5kb downstream 0.5kb downstream 3375 true Chr10: 4875534-4878908 Phaseolus vulgaris
Phvul.010G033400 0.5kb downstream 0.5kb downstream 500 false Chr10: 4875534-4876033 Phaseolus vulgaris
Phvul.010G033400 1.0kb upstream 1.0kb upstream 3875 true Chr10: 4876034-4879908 Phaseolus vulgaris
Phvul.010G033400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 4878909-4879908 Phaseolus vulgaris
Phvul.010G033400 1.0kb downstream 1.0kb downstream 3875 true Chr10: 4875034-4878908 Phaseolus vulgaris
Phvul.010G033400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 4875034-4876033 Phaseolus vulgaris
Phvul.010G033400 2.0kb upstream 2.0kb upstream 4875 true Chr10: 4876034-4880908 Phaseolus vulgaris
Phvul.010G033400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 4878909-4880908 Phaseolus vulgaris
Phvul.010G033400 2.0kb downstream 2.0kb downstream 4875 true Chr10: 4874034-4878908 Phaseolus vulgaris
Phvul.010G033400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 4874034-4876033 Phaseolus vulgaris
Phvul.010G033400 5.0kb upstream 5.0kb upstream 7875 true Chr10: 4876034-4883908 Phaseolus vulgaris
Phvul.010G033400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 4878909-4883908 Phaseolus vulgaris
Phvul.010G033400 5.0kb downstream 5.0kb downstream 7875 true Chr10: 4871034-4878908 Phaseolus vulgaris
Phvul.010G033400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 4871034-4876033 Phaseolus vulgaris
Phvul.010G033400 10.0kb upstream 10.0kb upstream 12875 true Chr10: 4876034-4888908 Phaseolus vulgaris
Phvul.010G033400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 4878909-4888908 Phaseolus vulgaris
Phvul.010G033400 10.0kb downstream 10.0kb downstream 12875 true Chr10: 4866034-4878908 Phaseolus vulgaris
Phvul.010G033400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 4866034-4876033 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309057 5265 Fabidae View MSA
124067828 5270 Rosid View MSA
123747461 5271 Pentapetalae View MSA
122786129 5272 Eudicot View MSA
122043766 5273 Angiosperm View MSA
121350885 5274 Embryophyte View MSA
123381922 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.94583 0.0 9.00263    
cufflinks 5.03652 0.0 14.5698    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.787313 0.0 2.81561   Low
cufflinks 15.4883 0.0 40.7897    
cufflinks 0.715042 0.0 2.56995   Low
cufflinks 19.1005 0.0 49.6728    
cufflinks 6.77017 0.0 18.9761    
cufflinks 17.553 0.0 45.81    
cufflinks 35.162 0.0 91.0707   High
cufflinks 26.6564 0.0 68.9165    

0 Strain