Gene : Phvul.010G035900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31791:SF12 - FRIGIDA-LIKE PROTEIN 3 Genomic Order:  352
Name:  ? Phvul.010G035900 Secondary Identifier:  ? PAC:37143813
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G035900 0.5kb upstream 0.5kb upstream 5698 true Chr10: 5296892-5302589 Phaseolus vulgaris
Phvul.010G035900 0.5kb upstream 0.5kb upstream 500 false Chr10: 5296892-5297391 Phaseolus vulgaris
Phvul.010G035900 0.5kb downstream 0.5kb downstream 5698 true Chr10: 5297392-5303089 Phaseolus vulgaris
Phvul.010G035900 0.5kb downstream 0.5kb downstream 500 false Chr10: 5302590-5303089 Phaseolus vulgaris
Phvul.010G035900 1.0kb upstream 1.0kb upstream 6198 true Chr10: 5296392-5302589 Phaseolus vulgaris
Phvul.010G035900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 5296392-5297391 Phaseolus vulgaris
Phvul.010G035900 1.0kb downstream 1.0kb downstream 6198 true Chr10: 5297392-5303589 Phaseolus vulgaris
Phvul.010G035900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 5302590-5303589 Phaseolus vulgaris
Phvul.010G035900 2.0kb upstream 2.0kb upstream 7198 true Chr10: 5295392-5302589 Phaseolus vulgaris
Phvul.010G035900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 5295392-5297391 Phaseolus vulgaris
Phvul.010G035900 2.0kb downstream 2.0kb downstream 7198 true Chr10: 5297392-5304589 Phaseolus vulgaris
Phvul.010G035900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 5302590-5304589 Phaseolus vulgaris
Phvul.010G035900 5.0kb upstream 5.0kb upstream 10198 true Chr10: 5292392-5302589 Phaseolus vulgaris
Phvul.010G035900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 5292392-5297391 Phaseolus vulgaris
Phvul.010G035900 5.0kb downstream 5.0kb downstream 10198 true Chr10: 5297392-5307589 Phaseolus vulgaris
Phvul.010G035900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 5302590-5307589 Phaseolus vulgaris
Phvul.010G035900 10.0kb upstream 10.0kb upstream 15198 true Chr10: 5287392-5302589 Phaseolus vulgaris
Phvul.010G035900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 5287392-5297391 Phaseolus vulgaris
Phvul.010G035900 10.0kb downstream 10.0kb downstream 15198 true Chr10: 5297392-5312589 Phaseolus vulgaris
Phvul.010G035900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 5302590-5312589 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313413 5265 Fabidae View MSA
124068381 5270 Rosid View MSA
123736427 5271 Pentapetalae View MSA
122790355 5272 Eudicot View MSA
122047978 5273 Angiosperm View MSA
121351127 5274 Embryophyte View MSA
123382017 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 62.138 0.0 169.47 High  
cufflinks 88.0182 0.0 248.412 High  
cufflinks 55.2023 0.0 149.097 High Low
cufflinks 53.0697 0.0 141.693 High Low
cufflinks 72.3556 0.0 198.877 High  
cufflinks 108.626 0.0 315.188 High High
cufflinks 76.2098 0.0 211.596 High  
cufflinks 60.1961 0.0 163.815 High  
cufflinks 102.466 0.0 293.617 High High
cufflinks 78.1526 0.0 217.305 High  
cufflinks 88.1131 0.0 247.303 High  

0 Strain