Gene : Phvul.010G036000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31791:SF12 - FRIGIDA-LIKE PROTEIN 3 Genomic Order:  353
Name:  ? Phvul.010G036000 Secondary Identifier:  ? PAC:37144234
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G036000 0.5kb upstream 0.5kb upstream 6697 true Chr10: 5314719-5321415 Phaseolus vulgaris
Phvul.010G036000 0.5kb upstream 0.5kb upstream 500 false Chr10: 5314719-5315218 Phaseolus vulgaris
Phvul.010G036000 0.5kb downstream 0.5kb downstream 6697 true Chr10: 5315219-5321915 Phaseolus vulgaris
Phvul.010G036000 0.5kb downstream 0.5kb downstream 500 false Chr10: 5321416-5321915 Phaseolus vulgaris
Phvul.010G036000 1.0kb upstream 1.0kb upstream 7197 true Chr10: 5314219-5321415 Phaseolus vulgaris
Phvul.010G036000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 5314219-5315218 Phaseolus vulgaris
Phvul.010G036000 1.0kb downstream 1.0kb downstream 7197 true Chr10: 5315219-5322415 Phaseolus vulgaris
Phvul.010G036000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 5321416-5322415 Phaseolus vulgaris
Phvul.010G036000 2.0kb upstream 2.0kb upstream 8197 true Chr10: 5313219-5321415 Phaseolus vulgaris
Phvul.010G036000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 5313219-5315218 Phaseolus vulgaris
Phvul.010G036000 2.0kb downstream 2.0kb downstream 8197 true Chr10: 5315219-5323415 Phaseolus vulgaris
Phvul.010G036000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 5321416-5323415 Phaseolus vulgaris
Phvul.010G036000 5.0kb upstream 5.0kb upstream 11197 true Chr10: 5310219-5321415 Phaseolus vulgaris
Phvul.010G036000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 5310219-5315218 Phaseolus vulgaris
Phvul.010G036000 5.0kb downstream 5.0kb downstream 11197 true Chr10: 5315219-5326415 Phaseolus vulgaris
Phvul.010G036000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 5321416-5326415 Phaseolus vulgaris
Phvul.010G036000 10.0kb upstream 10.0kb upstream 16197 true Chr10: 5305219-5321415 Phaseolus vulgaris
Phvul.010G036000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 5305219-5315218 Phaseolus vulgaris
Phvul.010G036000 10.0kb downstream 10.0kb downstream 16197 true Chr10: 5315219-5331415 Phaseolus vulgaris
Phvul.010G036000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 5321416-5331415 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313413 5265 Fabidae View MSA
124068381 5270 Rosid View MSA
123736427 5271 Pentapetalae View MSA
122790355 5272 Eudicot View MSA
122047978 5273 Angiosperm View MSA
121351127 5274 Embryophyte View MSA
123382017 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 67.2218 0.0 244.233 High  
cufflinks 84.1255 0.0 321.702 High High
cufflinks 59.4421 0.0 212.375 High  
cufflinks 55.3368 0.0 189.398 High  
cufflinks 61.6205 0.0 216.305 High  
cufflinks 79.5702 0.0 301.077 High High
cufflinks 62.2235 0.0 222.339 High  
cufflinks 56.9047 0.0 201.872 High  
cufflinks 51.111 0.0 173.643 High Low
cufflinks 59.5479 0.0 211.498 High  
cufflinks 78.0609 0.0 288.952 High High

0 Strain