Gene : Phvul.010G039600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR21576//PTHR21576:SF28 - UNCHARACTERIZED NODULIN-LIKE PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  388
Name:  ? Phvul.010G039600 Secondary Identifier:  ? PAC:37142520
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G039600 0.5kb upstream 0.5kb upstream 5372 true Chr10: 5816162-5821533 Phaseolus vulgaris
Phvul.010G039600 0.5kb upstream 0.5kb upstream 500 false Chr10: 5816162-5816661 Phaseolus vulgaris
Phvul.010G039600 0.5kb downstream 0.5kb downstream 5372 true Chr10: 5816662-5822033 Phaseolus vulgaris
Phvul.010G039600 0.5kb downstream 0.5kb downstream 500 false Chr10: 5821534-5822033 Phaseolus vulgaris
Phvul.010G039600 1.0kb upstream 1.0kb upstream 5872 true Chr10: 5815662-5821533 Phaseolus vulgaris
Phvul.010G039600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 5815662-5816661 Phaseolus vulgaris
Phvul.010G039600 1.0kb downstream 1.0kb downstream 5872 true Chr10: 5816662-5822533 Phaseolus vulgaris
Phvul.010G039600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 5821534-5822533 Phaseolus vulgaris
Phvul.010G039600 2.0kb upstream 2.0kb upstream 6872 true Chr10: 5814662-5821533 Phaseolus vulgaris
Phvul.010G039600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 5814662-5816661 Phaseolus vulgaris
Phvul.010G039600 2.0kb downstream 2.0kb downstream 6872 true Chr10: 5816662-5823533 Phaseolus vulgaris
Phvul.010G039600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 5821534-5823533 Phaseolus vulgaris
Phvul.010G039600 5.0kb upstream 5.0kb upstream 9872 true Chr10: 5811662-5821533 Phaseolus vulgaris
Phvul.010G039600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 5811662-5816661 Phaseolus vulgaris
Phvul.010G039600 5.0kb downstream 5.0kb downstream 9872 true Chr10: 5816662-5826533 Phaseolus vulgaris
Phvul.010G039600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 5821534-5826533 Phaseolus vulgaris
Phvul.010G039600 10.0kb upstream 10.0kb upstream 14872 true Chr10: 5806662-5821533 Phaseolus vulgaris
Phvul.010G039600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 5806662-5816661 Phaseolus vulgaris
Phvul.010G039600 10.0kb downstream 10.0kb downstream 14872 true Chr10: 5816662-5831533 Phaseolus vulgaris
Phvul.010G039600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 5821534-5831533 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041179 5273 Angiosperm View MSA
122309167 5265 Fabidae View MSA
124070185 5270 Rosid View MSA
123747845 5271 Pentapetalae View MSA
122792896 5272 Eudicot View MSA
123429121 5275 Viridiplantae View MSA
121309810 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.5179 0.0 13.4427    
cufflinks 2.53549 0.0 8.02545   Low
cufflinks 2.71399 0.0 8.50466   Low
cufflinks 10.4044 0.0 28.4607   High
cufflinks 7.53654 0.0 21.2312    
cufflinks 3.87276 0.0 11.6961    
cufflinks 8.06296 0.0 22.5556    
cufflinks 3.5085 0.0 10.6924    
cufflinks 7.51471 0.0 21.1627    
cufflinks 2.42859 0.0 7.73232   Low
cufflinks 8.04446 0.0 22.5517    

0 Strain