Gene : Phvul.005G167100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23076:SF56 - AAA-TYPE ATPASE FAMILY PROTEIN Genomic Order:  1563
Name:  ? Phvul.005G167100 Secondary Identifier:  ? PAC:37152729
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G167100 0.5kb upstream 0.5kb upstream 6511 true Chr05: 39435637-39442147 Phaseolus vulgaris
Phvul.005G167100 0.5kb upstream 0.5kb upstream 500 false Chr05: 39435637-39436136 Phaseolus vulgaris
Phvul.005G167100 0.5kb downstream 0.5kb downstream 6511 true Chr05: 39436137-39442647 Phaseolus vulgaris
Phvul.005G167100 0.5kb downstream 0.5kb downstream 500 false Chr05: 39442148-39442647 Phaseolus vulgaris
Phvul.005G167100 1.0kb upstream 1.0kb upstream 7011 true Chr05: 39435137-39442147 Phaseolus vulgaris
Phvul.005G167100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 39435137-39436136 Phaseolus vulgaris
Phvul.005G167100 1.0kb downstream 1.0kb downstream 7011 true Chr05: 39436137-39443147 Phaseolus vulgaris
Phvul.005G167100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 39442148-39443147 Phaseolus vulgaris
Phvul.005G167100 2.0kb upstream 2.0kb upstream 8011 true Chr05: 39434137-39442147 Phaseolus vulgaris
Phvul.005G167100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 39434137-39436136 Phaseolus vulgaris
Phvul.005G167100 2.0kb downstream 2.0kb downstream 8011 true Chr05: 39436137-39444147 Phaseolus vulgaris
Phvul.005G167100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 39442148-39444147 Phaseolus vulgaris
Phvul.005G167100 5.0kb upstream 5.0kb upstream 11011 true Chr05: 39431137-39442147 Phaseolus vulgaris
Phvul.005G167100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 39431137-39436136 Phaseolus vulgaris
Phvul.005G167100 5.0kb downstream 5.0kb downstream 11011 true Chr05: 39436137-39447147 Phaseolus vulgaris
Phvul.005G167100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 39442148-39447147 Phaseolus vulgaris
Phvul.005G167100 10.0kb upstream 10.0kb upstream 16011 true Chr05: 39426137-39442147 Phaseolus vulgaris
Phvul.005G167100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 39426137-39436136 Phaseolus vulgaris
Phvul.005G167100 10.0kb downstream 10.0kb downstream 16011 true Chr05: 39436137-39452147 Phaseolus vulgaris
Phvul.005G167100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 39442148-39452147 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306088 5265 Fabidae View MSA
124063908 5270 Rosid View MSA
123740118 5271 Pentapetalae View MSA
122786988 5272 Eudicot View MSA
122046642 5273 Angiosperm View MSA
121346512 5274 Embryophyte View MSA
123425128 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.32169 0.0 21.546    
cufflinks 11.9095 0.0 30.8198    
cufflinks 30.6439 0.0 83.7119   High
cufflinks 6.64607 0.0 17.3871   Low
cufflinks 11.5551 0.0 29.8807    
cufflinks 22.7406 0.0 60.6662   High
cufflinks 8.73688 0.0 22.5902    
cufflinks 9.76652 0.0 25.2446    
cufflinks 9.89763 0.0 25.584    
cufflinks 13.3376 0.0 34.5734    
cufflinks 8.8627 0.0 22.9273    

0 Strain