Gene : Phvul.010G020500 P. vulgaris v2.1
Defline:  (1 of 1) K05292 - phosphatidylinositol glycan, class T (PIGT) Genomic Order:  197
Name:  ? Phvul.010G020500 Secondary Identifier:  ? PAC:37144093
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G020500 0.5kb upstream 0.5kb upstream 6169 true Chr10: 2955346-2961514 Phaseolus vulgaris
Phvul.010G020500 0.5kb upstream 0.5kb upstream 500 false Chr10: 2961015-2961514 Phaseolus vulgaris
Phvul.010G020500 0.5kb downstream 0.5kb downstream 6169 true Chr10: 2954846-2961014 Phaseolus vulgaris
Phvul.010G020500 0.5kb downstream 0.5kb downstream 500 false Chr10: 2954846-2955345 Phaseolus vulgaris
Phvul.010G020500 1.0kb upstream 1.0kb upstream 6669 true Chr10: 2955346-2962014 Phaseolus vulgaris
Phvul.010G020500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 2961015-2962014 Phaseolus vulgaris
Phvul.010G020500 1.0kb downstream 1.0kb downstream 6669 true Chr10: 2954346-2961014 Phaseolus vulgaris
Phvul.010G020500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 2954346-2955345 Phaseolus vulgaris
Phvul.010G020500 2.0kb upstream 2.0kb upstream 7669 true Chr10: 2955346-2963014 Phaseolus vulgaris
Phvul.010G020500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 2961015-2963014 Phaseolus vulgaris
Phvul.010G020500 2.0kb downstream 2.0kb downstream 7669 true Chr10: 2953346-2961014 Phaseolus vulgaris
Phvul.010G020500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 2953346-2955345 Phaseolus vulgaris
Phvul.010G020500 5.0kb upstream 5.0kb upstream 10669 true Chr10: 2955346-2966014 Phaseolus vulgaris
Phvul.010G020500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 2961015-2966014 Phaseolus vulgaris
Phvul.010G020500 5.0kb downstream 5.0kb downstream 10669 true Chr10: 2950346-2961014 Phaseolus vulgaris
Phvul.010G020500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 2950346-2955345 Phaseolus vulgaris
Phvul.010G020500 10.0kb upstream 10.0kb upstream 15669 true Chr10: 2955346-2971014 Phaseolus vulgaris
Phvul.010G020500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 2961015-2971014 Phaseolus vulgaris
Phvul.010G020500 10.0kb downstream 10.0kb downstream 15669 true Chr10: 2945346-2961014 Phaseolus vulgaris
Phvul.010G020500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 2945346-2955345 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302034 5265 Fabidae View MSA
124065019 5270 Rosid View MSA
123738275 5271 Pentapetalae View MSA
122788314 5272 Eudicot View MSA
122043448 5273 Angiosperm View MSA
121344802 5274 Embryophyte View MSA
123425263 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.65104 0.0 12.9909   Low
cufflinks 7.28523 0.0 19.6382    
cufflinks 5.16286 0.0 14.269    
cufflinks 8.43902 0.0 22.5464   High
cufflinks 6.71988 0.0 18.2931    
cufflinks 6.44702 0.0 17.5478    
cufflinks 5.36271 0.0 14.8663    
cufflinks 4.70478 0.0 13.1306   Low
cufflinks 6.82891 0.0 18.586    
cufflinks 6.1146 0.0 16.7261    
cufflinks 6.00059 0.0 16.5141    

0 Strain