Gene : Phvul.005G167400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10366:SF307 - TETRAKETIDE ALPHA-PYRONE REDUCTASE 1 Genomic Order:  1566
Name:  ? Phvul.005G167400 Secondary Identifier:  ? PAC:37154219
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G167400 0.5kb upstream 0.5kb upstream 2414 true Chr05: 39451375-39453788 Phaseolus vulgaris
Phvul.005G167400 0.5kb upstream 0.5kb upstream 500 false Chr05: 39453289-39453788 Phaseolus vulgaris
Phvul.005G167400 0.5kb downstream 0.5kb downstream 2414 true Chr05: 39450875-39453288 Phaseolus vulgaris
Phvul.005G167400 0.5kb downstream 0.5kb downstream 500 false Chr05: 39450875-39451374 Phaseolus vulgaris
Phvul.005G167400 1.0kb upstream 1.0kb upstream 2914 true Chr05: 39451375-39454288 Phaseolus vulgaris
Phvul.005G167400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 39453289-39454288 Phaseolus vulgaris
Phvul.005G167400 1.0kb downstream 1.0kb downstream 2914 true Chr05: 39450375-39453288 Phaseolus vulgaris
Phvul.005G167400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 39450375-39451374 Phaseolus vulgaris
Phvul.005G167400 2.0kb upstream 2.0kb upstream 3914 true Chr05: 39451375-39455288 Phaseolus vulgaris
Phvul.005G167400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 39453289-39455288 Phaseolus vulgaris
Phvul.005G167400 2.0kb downstream 2.0kb downstream 3914 true Chr05: 39449375-39453288 Phaseolus vulgaris
Phvul.005G167400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 39449375-39451374 Phaseolus vulgaris
Phvul.005G167400 5.0kb upstream 5.0kb upstream 6914 true Chr05: 39451375-39458288 Phaseolus vulgaris
Phvul.005G167400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 39453289-39458288 Phaseolus vulgaris
Phvul.005G167400 5.0kb downstream 5.0kb downstream 6914 true Chr05: 39446375-39453288 Phaseolus vulgaris
Phvul.005G167400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 39446375-39451374 Phaseolus vulgaris
Phvul.005G167400 10.0kb upstream 10.0kb upstream 11914 true Chr05: 39451375-39463288 Phaseolus vulgaris
Phvul.005G167400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 39453289-39463288 Phaseolus vulgaris
Phvul.005G167400 10.0kb downstream 10.0kb downstream 11914 true Chr05: 39441375-39453288 Phaseolus vulgaris
Phvul.005G167400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 39441375-39451374 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308427 5265 Fabidae View MSA
124063942 5270 Rosid View MSA
123739660 5271 Pentapetalae View MSA
122785878 5272 Eudicot View MSA
122047084 5273 Angiosperm View MSA
121347688 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain