Gene : Phvul.005G167800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24089:SF270 - SOLUTE CARRIER FAMILY 25 MEMBER 48 Genomic Order:  1570
Name:  ? Phvul.005G167800 Secondary Identifier:  ? PAC:37153284
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G167800 0.5kb upstream 0.5kb upstream 2906 true Chr05: 39472385-39475290 Phaseolus vulgaris
Phvul.005G167800 0.5kb upstream 0.5kb upstream 500 false Chr05: 39472385-39472884 Phaseolus vulgaris
Phvul.005G167800 0.5kb downstream 0.5kb downstream 2906 true Chr05: 39472885-39475790 Phaseolus vulgaris
Phvul.005G167800 0.5kb downstream 0.5kb downstream 500 false Chr05: 39475291-39475790 Phaseolus vulgaris
Phvul.005G167800 1.0kb upstream 1.0kb upstream 3406 true Chr05: 39471885-39475290 Phaseolus vulgaris
Phvul.005G167800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 39471885-39472884 Phaseolus vulgaris
Phvul.005G167800 1.0kb downstream 1.0kb downstream 3406 true Chr05: 39472885-39476290 Phaseolus vulgaris
Phvul.005G167800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 39475291-39476290 Phaseolus vulgaris
Phvul.005G167800 2.0kb upstream 2.0kb upstream 4406 true Chr05: 39470885-39475290 Phaseolus vulgaris
Phvul.005G167800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 39470885-39472884 Phaseolus vulgaris
Phvul.005G167800 2.0kb downstream 2.0kb downstream 4406 true Chr05: 39472885-39477290 Phaseolus vulgaris
Phvul.005G167800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 39475291-39477290 Phaseolus vulgaris
Phvul.005G167800 5.0kb upstream 5.0kb upstream 7406 true Chr05: 39467885-39475290 Phaseolus vulgaris
Phvul.005G167800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 39467885-39472884 Phaseolus vulgaris
Phvul.005G167800 5.0kb downstream 5.0kb downstream 7406 true Chr05: 39472885-39480290 Phaseolus vulgaris
Phvul.005G167800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 39475291-39480290 Phaseolus vulgaris
Phvul.005G167800 10.0kb upstream 10.0kb upstream 12406 true Chr05: 39462885-39475290 Phaseolus vulgaris
Phvul.005G167800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 39462885-39472884 Phaseolus vulgaris
Phvul.005G167800 10.0kb downstream 10.0kb downstream 12406 true Chr05: 39472885-39485290 Phaseolus vulgaris
Phvul.005G167800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 39475291-39485290 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310669 5265 Fabidae View MSA
124060460 5270 Rosid View MSA
123737609 5271 Pentapetalae View MSA
122793075 5272 Eudicot View MSA
122045796 5273 Angiosperm View MSA
123429077 5275 Viridiplantae View MSA
121349185 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.1969 0.0 90.9837 High High
cufflinks 9.60333 0.0 26.5598    
cufflinks 0.60222 0.0 2.23414   Low
cufflinks 14.1916 0.0 38.2347   High
cufflinks 1.00056 0.0 3.56591    
cufflinks 1.23752 0.0 4.28507    
cufflinks 2.73091 0.0 8.62243    
cufflinks 4.41197 0.0 13.1525    
cufflinks 1.2748 0.0 4.39992    
cufflinks 2.22953 0.0 7.25147    
cufflinks 1.77985 0.0 5.9325    

0 Strain