Gene : Phvul.010G018800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10799//PTHR10799:SF698 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // SUBFAMILY NOT NAMED Genomic Order:  178
Name:  ? Phvul.010G018800 Secondary Identifier:  ? PAC:37142964
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G018800 0.5kb upstream 0.5kb upstream 25293 true Chr10: 2733469-2758761 Phaseolus vulgaris
Phvul.010G018800 0.5kb upstream 0.5kb upstream 500 false Chr10: 2758262-2758761 Phaseolus vulgaris
Phvul.010G018800 0.5kb downstream 0.5kb downstream 25293 true Chr10: 2732969-2758261 Phaseolus vulgaris
Phvul.010G018800 0.5kb downstream 0.5kb downstream 500 false Chr10: 2732969-2733468 Phaseolus vulgaris
Phvul.010G018800 1.0kb upstream 1.0kb upstream 25793 true Chr10: 2733469-2759261 Phaseolus vulgaris
Phvul.010G018800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 2758262-2759261 Phaseolus vulgaris
Phvul.010G018800 1.0kb downstream 1.0kb downstream 25793 true Chr10: 2732469-2758261 Phaseolus vulgaris
Phvul.010G018800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 2732469-2733468 Phaseolus vulgaris
Phvul.010G018800 2.0kb upstream 2.0kb upstream 26793 true Chr10: 2733469-2760261 Phaseolus vulgaris
Phvul.010G018800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 2758262-2760261 Phaseolus vulgaris
Phvul.010G018800 2.0kb downstream 2.0kb downstream 26793 true Chr10: 2731469-2758261 Phaseolus vulgaris
Phvul.010G018800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 2731469-2733468 Phaseolus vulgaris
Phvul.010G018800 5.0kb upstream 5.0kb upstream 29793 true Chr10: 2733469-2763261 Phaseolus vulgaris
Phvul.010G018800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 2758262-2763261 Phaseolus vulgaris
Phvul.010G018800 5.0kb downstream 5.0kb downstream 29793 true Chr10: 2728469-2758261 Phaseolus vulgaris
Phvul.010G018800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 2728469-2733468 Phaseolus vulgaris
Phvul.010G018800 10.0kb upstream 10.0kb upstream 34793 true Chr10: 2733469-2768261 Phaseolus vulgaris
Phvul.010G018800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 2758262-2768261 Phaseolus vulgaris
Phvul.010G018800 10.0kb downstream 10.0kb downstream 34793 true Chr10: 2723469-2758261 Phaseolus vulgaris
Phvul.010G018800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 2723469-2733468 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026618 5273 Angiosperm View MSA
122254806 5265 Fabidae View MSA
123996810 5270 Rosid View MSA
123747187 5271 Pentapetalae View MSA
122790162 5272 Eudicot View MSA
121351372 5274 Embryophyte View MSA
123428399 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.21017 0.0 10.184   Low
cufflinks 4.4343 0.0 26.4994    
cufflinks 8.4678 0.0 51.2355    
cufflinks 1.23854 0.0 6.3049   Low
cufflinks 5.19662 0.0 32.0458    
cufflinks 8.86945 0.0 47.3939    
cufflinks 8.1973 0.0 53.2071    
cufflinks 7.85887 0.0 40.8644    
cufflinks 6.8235 0.0 36.9489    
cufflinks 7.19521 0.0 45.0414    
cufflinks 3.50929 0.0 21.2912    

0 Strain