Gene : Phvul.005G170000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10926//PTHR10926:SF28 - CELL CYCLE CONTROL PROTEIN 50 // SUBFAMILY NOT NAMED Genomic Order:  1592
Name:  ? Phvul.005G170000 Secondary Identifier:  ? PAC:37152264
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G170000 0.5kb upstream 0.5kb upstream 3051 true Chr05: 39617601-39620651 Phaseolus vulgaris
Phvul.005G170000 0.5kb upstream 0.5kb upstream 500 false Chr05: 39620152-39620651 Phaseolus vulgaris
Phvul.005G170000 0.5kb downstream 0.5kb downstream 3051 true Chr05: 39617101-39620151 Phaseolus vulgaris
Phvul.005G170000 0.5kb downstream 0.5kb downstream 500 false Chr05: 39617101-39617600 Phaseolus vulgaris
Phvul.005G170000 1.0kb upstream 1.0kb upstream 3551 true Chr05: 39617601-39621151 Phaseolus vulgaris
Phvul.005G170000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 39620152-39621151 Phaseolus vulgaris
Phvul.005G170000 1.0kb downstream 1.0kb downstream 3551 true Chr05: 39616601-39620151 Phaseolus vulgaris
Phvul.005G170000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 39616601-39617600 Phaseolus vulgaris
Phvul.005G170000 2.0kb upstream 2.0kb upstream 4551 true Chr05: 39617601-39622151 Phaseolus vulgaris
Phvul.005G170000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 39620152-39622151 Phaseolus vulgaris
Phvul.005G170000 2.0kb downstream 2.0kb downstream 4551 true Chr05: 39615601-39620151 Phaseolus vulgaris
Phvul.005G170000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 39615601-39617600 Phaseolus vulgaris
Phvul.005G170000 5.0kb upstream 5.0kb upstream 7551 true Chr05: 39617601-39625151 Phaseolus vulgaris
Phvul.005G170000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 39620152-39625151 Phaseolus vulgaris
Phvul.005G170000 5.0kb downstream 5.0kb downstream 7551 true Chr05: 39612601-39620151 Phaseolus vulgaris
Phvul.005G170000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 39612601-39617600 Phaseolus vulgaris
Phvul.005G170000 10.0kb upstream 10.0kb upstream 12551 true Chr05: 39617601-39630151 Phaseolus vulgaris
Phvul.005G170000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 39620152-39630151 Phaseolus vulgaris
Phvul.005G170000 10.0kb downstream 10.0kb downstream 12551 true Chr05: 39607601-39620151 Phaseolus vulgaris
Phvul.005G170000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 39607601-39617600 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314219 5265 Fabidae View MSA
124071638 5270 Rosid View MSA
123747358 5271 Pentapetalae View MSA
122796482 5272 Eudicot View MSA
122050302 5273 Angiosperm View MSA
121349346 5274 Embryophyte View MSA
123425782 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.048486 0.0 0.235068 Low Low
cufflinks 0.951783 0.0 5.42773   High
cufflinks 0.083756 0.0 0.369269 Low Low
cufflinks 0.329136 0.0 1.2887 Low  
cufflinks 0.17581 0.0 0.72542 Low  
cufflinks 0.284662 0.0 2.10368 Low  
cufflinks 0.215649 0.0 0.868404 Low  
cufflinks 0.374866 0.0 2.70911 Low  
cufflinks 0.116738 0.0 0.495004 Low  
cufflinks 0.118777 0.0 0.510524 Low  
cufflinks 0.827164 0.0 5.09572   High

0 Strain